RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 PPP3CCP48454 512 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 AIF1P55008 147 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 MFSD7Q6UXD7 560 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 SPOCD1Q6ZMY3 1216 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 ANKS1BQ7Z6G8 1248 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 CCDC185Q8N715 623 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 LRRN4CLQ8ND94 238 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 RNF25Q96BH1 459 aaPredicted RBP25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 PLEKHA4Q9H4M7 779 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 UXTQ9UBK9 157 aaPredicted RBP25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 LRRD1A4D1F6 860 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 PI4K2BG5E9Z4 385 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 LRG1P02750 347 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 PPP2R5EQ16537 467 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 ZFYVE27Q5T4F4 411 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 VSIG1Q86XK7 387 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 SPATA4Q8NEY3 305 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 HDAC7Q8WUI4 952 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 HSPH1Q92598 858 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 FZD10Q9ULW2 581 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 SYNJ2BP-COX16A0A087WUM0 186 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 ZNF840PA6NDX5 716 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 CETN2P41208 172 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 CDKN2BP42772 138 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 SCAPQ12770 1279 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 NNTQ13423 1086 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 PDK2Q15119 407 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 TAF12Q16514 161 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 DPYSL2Q16555 572 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 LONRF2Q1L5Z9 754 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 RSRC2Q7L4I2 434 aaKnown RBP25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 CCDC50Q8IVM0 306 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 TIFAQ96CG3 184 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 ZNF512Q96ME7 567 aaPredicted RBP25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 SERPINB11Q96P15 392 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 CDK5RAP1Q96SZ6 601 aaKnown RBP25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 OSBPL8Q9BZF1 889 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 COX16Q9P0S2 106 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 AP4E1Q9UPM8 1137 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 EFR3BQ9Y2G0 817 aa25.87■■□□□ 1.73
SHARPIN-201ENST00000359551 EPOPA6NHQ4 379 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 TADA3O75528 432 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 ODF2Q5BJF6 829 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 TFDP3Q5H9I0 405 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 SND1Q7KZF4 910 aaKnown RBP eCLIP25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 KCTD6Q8NC69 237 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 GDPD5Q8WTR4 605 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 HERPUD2Q9BSE4 406 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 SFMBT1Q9UHJ3 866 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 NUDT5Q9UKK9 219 aa25.86■■□□□ 1.73
SHARPIN-201ENST00000359551 hCG_1818297A0A087WSY0 165 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 ZMYND10O75800 440 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 HOXA9P31269 272 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 ADRA1BP35368 520 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 TUBP50607 506 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 KLF1Q13351 362 aaPredicted RBP25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 CA9Q16790 459 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 ZC3H12AQ5D1E8 599 aaKnown RBP25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 LRRC3Q9BY71 257 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 IL21Q9HBE4 155 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 ZNF334Q9HCZ1 680 aaPredicted RBP25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 MAN1C1Q9NR34 630 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 GPATCH2LQ9NWQ4 482 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 TRPM5Q9NZQ8 1165 aa25.85■■□□□ 1.73
SHARPIN-201ENST00000359551 ZNF487B1APH4 448 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 TLR5O60602 858 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 F11P03951 625 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 CD48P09326 243 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 CDH6P55285 790 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 PPP2R5DQ14738 602 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 BRMS1LQ5PSV4 323 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 PPM1LQ5SGD2 360 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 KLHDC10Q6PID8 442 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 TMEM150AQ86TG1 271 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 ZDHHC14Q8IZN3 488 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 MYRIPQ8NFW9 859 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 WDCPQ9H6R7 721 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 PCDH18Q9HCL0 1135 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 MTMR10Q9NXD2 777 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 TLR6Q9Y2C9 796 aa25.84■■□□□ 1.73
SHARPIN-201ENST00000359551 EPCAMP16422 314 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 L1CAMP32004 1257 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 DPYSL3Q14195 570 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 SIX1Q15475 284 aaPredicted RBP25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 ADGRD2Q7Z7M1 963 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 TMC8Q8IU68 726 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 MAP7D3Q8IWC1 876 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 SLC39A13Q96H72 371 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 CCSER2Q9H7U1 834 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 ANLNQ9NQW6 1124 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 ARHGEF38Q9NXL2 777 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 DOCK6Q96HP0 2047 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 TCRBV7S2A1N4TA0A589 114 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 EFCAB8A8MWE9 144 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 I6L893 689 aaPredicted RBP25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 MSI1O43347 362 aaKnown RBP25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 ARL13BQ3SXY8 428 aa25.83■■□□□ 1.73
SHARPIN-201ENST00000359551 C10orf120Q5SQS8 335 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms