RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 ZNF544Q6NX49 715 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 CNPY3Q9BT09 278 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 ILKAPQ9H0C8 392 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 GGT7Q9UJ14 662 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 JCHAINP01591 159 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 POLR2LP62875 67 aaKnown RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 PLOD1Q02809 727 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 SUGP1Q8IWZ8 645 aaKnown RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 NFASCO94856 1347 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 TOMM70O94826 608 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 NUDT14O95848 222 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 IFNA14P01570 189 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 GRK4P32298 578 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 NDST1P52848 882 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 ICE2Q659A1 982 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 GLT6D1Q7Z4J2 308 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 VN1R5Q7Z5H4 357 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 RXFP2Q8WXD0 754 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 ELOVL6Q9H5J4 265 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 EXOSC4Q9NPD3 245 aaKnown RBP13.35□□□□□ -0.27
NLRC3-202ENST00000359128 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 IMPAD1Q9NX62 359 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
NLRC3-202ENST00000359128 RAD51CO43502 376 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 SKAP2O75563 359 aaPredicted RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 SERPINF2P08697 491 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 ZNF655Q8N720 491 aaPredicted RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 RBM22Q9NW64 420 aaKnown RBP eCLIP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TMEM245Q9H330 911 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 RAD54BQ9Y620 910 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 SMIM22K7EJ46 135 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 AMD1P17707 334 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 KCNJ1P48048 391 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 LUZP2Q86TE4 346 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 CELF6Q96J87 481 aaKnown RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 MEI4A8MW99 385 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TAL1P17542 331 aaPredicted RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 CCL23P55773 120 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 GUCY1A3Q02108 690 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 NLRP9Q7RTR0 991 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 STRA8Q7Z7C7 330 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 REPS1Q96D71 796 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 GSTM1P09488 218 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 GJC2Q5T442 439 aaPredicted RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 USP45Q70EL2 814 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 CELF4Q9BZC1 486 aaKnown RBP13.34□□□□□ -0.27
NLRC3-202ENST00000359128 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 ZFYVE1Q9HBF4 777 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 TSPAN16Q9UKR8 245 aa13.34□□□□□ -0.27
NLRC3-202ENST00000359128 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 RNF103O00237 685 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 FKBP1AP62942 108 aaKnown RBP13.33□□□□□ -0.27
NLRC3-202ENST00000359128 BOP1Q14137 746 aaKnown RBP13.33□□□□□ -0.27
NLRC3-202ENST00000359128 CDK20Q8IZL9 346 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 CNDP1Q96KN2 507 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.27
NLRC3-202ENST00000359128 APOL2Q9BQE5 337 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 CYP4F12Q9HCS2 524 aa13.33□□□□□ -0.27
NLRC3-202ENST00000359128 TK2O00142 265 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 NOGQ13253 232 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 ATAD3BQ5T9A4 648 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 FGD2Q7Z6J4 655 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 ACOX2Q99424 681 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 THTPAQ9BU02 230 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 A0A088AWK7 358 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 ZNF10P21506 573 aaPredicted RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 GLRBP48167 497 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 ERFP50548 548 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 MARSP56192 900 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 CCT7Q99832 543 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 RBM12Q9NTZ6 932 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 COPG1Q9Y678 874 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 LGALS2P05162 132 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 JAK1P23458 1154 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 SP100P23497 879 aaPredicted RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 PPP2R1BP30154 601 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms