RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ADGRF2Q8IZF7 708 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 C1orf127Q8N9H9 656 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 CPT1BQ92523 772 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ADA2Q9NZK5 511 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 EPS15L1Q9UBC2 864 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 AHCYL1O43865 530 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 DGKIO75912 1065 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 PMLP29590 882 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 KPNA2P52292 529 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 GDF10P55107 478 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 GPR20Q99678 358 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 TRIM56Q9BRZ2 755 aaKnown RBP12.65□□□□□ -0.38
COL20A1-201ENST00000358894 PFDN4Q9NQP4 134 aa12.65□□□□□ -0.38
COL20A1-201ENST00000358894 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.39
COL20A1-201ENST00000358894 FAM237BA0A1B0GVD1 139 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 GPR25O00155 361 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ATP6V1B1P15313 513 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 MGAT1P26572 445 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 GLRBP48167 497 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 TSPY1Q01534 308 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 FNBP1LQ5T0N5 605 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 DEFB106AQ8N104 65 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CD101Q93033 1021 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 RNPEPQ9H4A4 650 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 FBXO6Q9NRD1 293 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ETNK2Q9NVF9 386 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 C2CD2Q9Y426 696 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 DOCK2Q92608 1830 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CYB561D2O14569 222 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 EDF1O60869 148 aaKnown RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ENTPD5O75356 428 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 APOEP02649 317 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ENO3P13929 434 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CALB2P22676 271 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 SLC12A1Q13621 1099 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 RNF43Q68DV7 783 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 KLC3Q6P597 504 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 TRIM74Q86UV6 250 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 TRIM73Q86UV7 250 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 DNAJB3Q8WWF6 145 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ZNF317Q96PQ6 595 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 TBCBQ99426 244 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 NHSL1Q5SYE7 1610 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 RRN3P2A6NIE6 340 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 RECQL4O94761 1208 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 PAMP19021 973 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 RPS6KA3P51812 740 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 PTP4A2Q12974 167 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 N4BP2L1Q5TBK1 243 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 HTR3CQ8WXA8 447 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 MECRQ9BV79 373 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 MRPL46Q9H2W6 279 aaKnown RBP12.64□□□□□ -0.39
COL20A1-201ENST00000358894 DCLRE1BQ9H816 532 aa12.64□□□□□ -0.39
COL20A1-201ENST00000358894 C5orf60A6NFR6 353 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 CXCL11O14625 94 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PMPCBO75439 489 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 FAM155BO75949 473 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 ATP4AP20648 1035 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 FDFT1P37268 417 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 MLH1P40692 756 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 ACAP1Q15027 740 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 LACTB2Q53H82 288 aaPredicted RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 MTHFD1LQ6UB35 978 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 THEM5Q8N1Q8 247 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 EDEM1Q92611 657 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 OLFM3Q96PB7 478 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 BCORQ6W2J9 1755 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GOLGA8TH3BQL2 631 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GLRA3O75311 464 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 TPH1P17752 444 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 FOXN2P32314 431 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PRAMEP78395 509 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 CYTH1Q15438 398 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 C4orf22Q6V702 233 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 XYLT1Q86Y38 959 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 GPC2Q8N158 579 aa12.63□□□□□ -0.39
COL20A1-201ENST00000358894 EZH1Q92800 747 aaPredicted RBP12.63□□□□□ -0.39
COL20A1-201ENST00000358894 PTPRN2Q92932 1015 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms