RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 TOP1MTQ969P6 601 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 PEBP4Q96S96 227 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 TRIM31Q9BZY9 425 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 DNPEPQ9ULA0 475 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 BACE2Q9Y5Z0 518 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 HACD1B0YJ81 288 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 NR1D1P20393 614 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 IGFBP6P24592 240 aaPredicted RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 SLC39A12Q504Y0 691 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 BRMS1LQ5PSV4 323 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 RELL1Q8IUW5 271 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 ATG4AQ8WYN0 398 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 HERPUD2Q9BSE4 406 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 FRMD8Q9BZ67 464 aaPredicted RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 BRD8Q9H0E9 1235 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
NFIX-201ENST00000358552 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 DONSONQ9NYP3 566 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 SCML2Q9UQR0 700 aa13.8□□□□□ -0.2
NFIX-201ENST00000358552 TSC2P49815 1807 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 E7ENQ6 273 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 NCAM2O15394 837 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 RBP3P10745 1247 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 SLC2A3P11169 496 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 KLRC2P26717 231 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 TUFMP49411 452 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 NDUFV1P49821 464 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 EIF3EP60228 445 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 DHX9Q08211 1270 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 NOMO1Q15155 1222 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 SH3PXD2AQ5TCZ1 1133 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 MFSD5Q6N075 450 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 TMC3Q7Z5M5 1100 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 HOOK3Q86VS8 718 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
NFIX-201ENST00000358552 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 CDK5RAP1Q96SZ6 601 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 AAASQ9NRG9 546 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 OLA1Q9NTK5 396 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 IL37Q9NZH6 218 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 FBXW11Q9UKB1 542 aa13.79□□□□□ -0.2
NFIX-201ENST00000358552 TPX2Q9ULW0 747 aaKnown RBP13.79□□□□□ -0.2
NFIX-201ENST00000358552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 BCLAF3A2AJT9 711 aaKnown RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 SGK1O00141 431 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TNFRSF10BO14763 440 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 RAG1P15918 1043 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 LAG3P18627 525 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 IL4RP24394 825 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 ADRA1BP35368 520 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 SLC5A3P53794 718 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 ROR1Q01973 937 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TTMPQ5BVD1 217 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 ANKS1BQ7Z6G8 1248 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CDKL3Q8IVW4 592 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 PLD5Q8N7P1 536 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 HINFPQ9BQA5 517 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 EPN3Q9H201 632 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PABPC3Q9H361 631 aaKnown RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 TMBIM4Q9HC24 238 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 TMLHEQ9NVH6 421 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CLIC5Q9NZA1 410 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 FAM92AA1XBS5 289 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 NDUFAB1O14561 156 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 DNALI1O14645 258 aaPredicted RBP13.78□□□□□ -0.2
NFIX-201ENST00000358552 B4GALT3O60512 393 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CPP00450 1065 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 FAM153BP0C7A2 387 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CYP2F1P24903 491 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 IVDP26440 423 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PPM1AP35813 382 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 CXCR3P49682 368 aa13.78□□□□□ -0.2
NFIX-201ENST00000358552 PMS2P54278 862 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms