RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 USP6NLQ92738 828 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 PLEKHA5Q9HAU0 1116 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 CACNG4Q9UBN1 327 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 PRKD1Q15139 912 aaPredicted RBP25.85■■□□□ 1.73
HDGF-201ENST00000357325 DGKDQ16760 1214 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 NCBP2-AS2Q69YL0 99 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 CENPIQ92674 756 aaPredicted RBP25.85■■□□□ 1.73
HDGF-201ENST00000357325 LGMNQ99538 433 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 EBF2Q9HAK2 575 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 DTLQ9NZJ0 730 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 HEY2Q9UBP5 337 aa25.85■■□□□ 1.73
HDGF-201ENST00000357325 MYO18AQ92614 2054 aaKnown RBP25.85■■□□□ 1.73
HDGF-201ENST00000357325 SYNJ2BP-COX16A0A087WUM0 186 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 DYNC1LI2O43237 492 aaPredicted RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 RFPL1O75677 317 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 NEFHP12036 1026 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 SERPINB4P48594 390 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 SLC45A4Q5BKX6 768 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 TTC39BQ5VTQ0 682 aaPredicted RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 ARHGAP17Q68EM7 881 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 DENND5BQ6ZUT9 1274 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 BRI3BPQ8WY22 251 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 GCOM2Q9BZD3 368 aaPredicted RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 SLC5A4Q9NY91 659 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 COX16Q9P0S2 106 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 ZNF638Q14966 1978 aaKnown RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 SMIM28A0A1B0GU29 152 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 A6NJR5 290 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 CLDN5O00501 218 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 SETSIPP0DME0 302 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 SMIM10L2AP0DMW4 78 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 SMIM10L2BP0DMW5 78 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 PRKCHP24723 683 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 GNL1P36915 607 aaPredicted RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 SLC26A9Q7LBE3 791 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 LONP2Q86WA8 852 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 ANKRD52Q8NB46 1076 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 FAM13CQ8NE31 585 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 DNAJB3Q8WWF6 145 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 PGLYRP2Q96PD5 576 aa25.84■■□□□ 1.73
HDGF-201ENST00000357325 TRIM6Q9C030 488 aaPredicted RBP25.84■■□□□ 1.73
HDGF-201ENST00000357325 CCL15-CCL14A0A0B4J2E2 113 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 COPEO14579 308 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 BEST1O76090 585 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 APOEP02649 317 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 TROVE2P10155 538 aaKnown RBP eCLIP25.83■■□□□ 1.73
HDGF-201ENST00000357325 MAGEA3P43357 314 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 MAGEA6P43360 314 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 PTPN9P43378 593 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 BST2Q10589 180 aaKnown RBP25.83■■□□□ 1.73
HDGF-201ENST00000357325 CCL15Q16663 113 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 FBXO47Q5MNV8 452 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 USP50Q70EL3 339 aaPredicted RBP25.83■■□□□ 1.73
HDGF-201ENST00000357325 TTC7BQ86TV6 843 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 TP53INP2Q8IXH6 220 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 LRRC52Q8N7C0 313 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 GPATCH11Q8N954 259 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 NSMCE1Q8WV22 266 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 MIPEPQ99797 713 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 ARL8BQ9NVJ2 186 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 CCDC195A0A1B0GUA6 201 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 FAM237BA0A1B0GVD1 139 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 CFAP69A5D8W1 941 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 KPNA7A9QM74 516 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 PIRO00625 290 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 SERPINB3P29508 390 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 MROH9Q5TGP6 573 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 NOTUMQ6P988 496 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 TLDC1Q6P9B6 456 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 VPS52Q8N1B4 723 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 TACO1Q9BSH4 297 aaKnown RBP25.83■■□□□ 1.73
HDGF-201ENST00000357325 TMEM120AQ9BXJ8 343 aa25.83■■□□□ 1.73
HDGF-201ENST00000357325 PIN4Q9Y237 131 aaKnown RBP25.83■■□□□ 1.73
HDGF-201ENST00000357325 DLDP09622 509 aaKnown RBP25.82■■□□□ 1.72
HDGF-201ENST00000357325 HOXD8P13378 290 aaPredicted RBP25.82■■□□□ 1.72
HDGF-201ENST00000357325 ACAT1P24752 427 aaKnown RBP25.82■■□□□ 1.72
HDGF-201ENST00000357325 KIRREL3Q8IZU9 778 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 ARRDC4Q8NCT1 418 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 ARMC2Q8NEN0 867 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 KCNV2Q8TDN2 545 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 TINF2Q9BSI4 451 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 DERAQ9Y315 318 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 USP3Q9Y6I4 520 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 DIAPH2O60879 1101 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 SPAG6O75602 509 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 DARSP14868 501 aaKnown RBP25.82■■□□□ 1.72
HDGF-201ENST00000357325 NDUFV1P49821 464 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 UNC93AQ86WB7 457 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 OSTM1Q86WC4 334 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 CHSY1Q86X52 802 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 CDKL3Q8IVW4 592 aaPredicted RBP25.82■■□□□ 1.72
HDGF-201ENST00000357325 STK32AQ8WU08 396 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 TRIM55Q9BYV6 548 aa25.82■■□□□ 1.72
HDGF-201ENST00000357325 GCATO75600 419 aa25.81■■□□□ 1.72
HDGF-201ENST00000357325 SNRPAP09012 282 aaKnown RBP25.81■■□□□ 1.72
HDGF-201ENST00000357325 CYP2C9P11712 490 aa25.81■■□□□ 1.72
HDGF-201ENST00000357325 DEFB106AQ8N104 65 aa25.81■■□□□ 1.72
HDGF-201ENST00000357325 OXNAD1Q96HP4 312 aaPredicted RBP25.81■■□□□ 1.72
HDGF-201ENST00000357325 CCND1P24385 295 aa25.81■■□□□ 1.72
HDGF-201ENST00000357325 ARFIP2P53365 341 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms