RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CRADDP78560 199 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 PTK7Q13308 1070 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 DDR2Q16832 855 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 MAP7D3Q8IWC1 876 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 CSPG4P5Q96PW8 444 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 SFMBT1Q9UHJ3 866 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 GOLGA8RI6L899 631 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 EIF3HO15372 352 aaKnown RBP eCLIP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 MOCS2O96007 188 aaPredicted RBP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 GRIK1P39086 918 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 AP1B1Q10567 949 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 BOLA3Q53S33 107 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 TTC16Q8NEE8 873 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 CFAP36Q96G28 342 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 WDR83Q9BRX9 315 aaKnown RBP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 CHST12Q9NRB3 414 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 PDCD11Q14690 1871 aaKnown RBP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 EXOC1LA0A1B0GW35 172 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 NUDT17P0C025 328 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 ODC1P11926 461 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 HOXD10P28358 340 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 LMNB2Q03252 620 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 NOMO1Q15155 1222 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 HIF1AQ16665 826 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 RSPH1Q8WYR4 309 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 ARHGEF2Q92974 986 aaKnown RBP18.29■□□□□ 0.52
NPAS3-202ENST00000356141 PCDH9Q9HC56 1237 aa18.29■□□□□ 0.52
NPAS3-202ENST00000356141 XIRP2A4UGR9 3374 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 KCNK1O00180 336 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 MFSD11O43934 449 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 SATB1Q01826 763 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 DSC3Q14574 896 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 GLB1LQ6UWU2 654 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 SYDE1Q6ZW31 735 aaPredicted RBP18.28■□□□□ 0.52
NPAS3-202ENST00000356141 C4orf33Q8N1A6 199 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 ZCCHC9Q8N567 271 aaKnown RBP18.28■□□□□ 0.52
NPAS3-202ENST00000356141 FBXO36Q8NEA4 188 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 TTLL3Q9Y4R7 772 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 NUP205Q92621 2012 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 TUSC3Q13454 348 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 MAP3K21Q5TCX8 1036 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 DENND5BQ6ZUT9 1274 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 EXOC3L1Q86VI1 746 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 CELF6Q96J87 481 aaKnown RBP18.28■□□□□ 0.52
NPAS3-202ENST00000356141 PRMT1Q99873 361 aaKnown RBP18.28■□□□□ 0.52
NPAS3-202ENST00000356141 SLC27A5Q9Y2P5 690 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 CHD7Q9P2D1 2997 aa18.28■□□□□ 0.52
NPAS3-202ENST00000356141 DESP17661 470 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 LHX1P48742 406 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 SPARCL1Q14515 664 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 EFHC1Q5JVL4 640 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 METTL23Q86XA0 190 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 THOC1Q96FV9 657 aaKnown RBP18.27■□□□□ 0.52
NPAS3-202ENST00000356141 HSFY1Q96LI6 401 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 PSD3Q9NYI0 1048 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 IL1RAPL1Q9NZN1 696 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 MDM4O15151 490 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 NBNO60934 754 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 METTL18O95568 372 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 QPCTQ16769 361 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 TRMT10CQ7L0Y3 403 aaKnown RBP18.27■□□□□ 0.52
NPAS3-202ENST00000356141 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 AGAP3Q96P47 875 aa18.27■□□□□ 0.52
NPAS3-202ENST00000356141 DRG1Q9Y295 367 aaKnown RBP18.27■□□□□ 0.52
NPAS3-202ENST00000356141 CCDC78A2IDD5 438 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 C2CD2LO14523 706 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 GBP1P32455 592 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 EIF3BP55884 814 aaKnown RBP18.27■□□□□ 0.51
NPAS3-202ENST00000356141 DAOAP59103 153 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.51
NPAS3-202ENST00000356141 TFDP2Q14188 446 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 SLC25A52Q3SY17 297 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 TMEM173Q86WV6 379 aaPredicted RBP18.27■□□□□ 0.51
NPAS3-202ENST00000356141 PYROXD1Q8WU10 500 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 FAM193BQ96PV7 902 aaPredicted RBP18.27■□□□□ 0.51
NPAS3-202ENST00000356141 POPDC2Q9HBU9 364 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 TBC1D13Q9NVG8 400 aa18.27■□□□□ 0.51
NPAS3-202ENST00000356141 ACADSBP45954 432 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 YWHAGP61981 247 aaKnown RBP eCLIP18.26■□□□□ 0.51
NPAS3-202ENST00000356141 LIMS2Q7Z4I7 341 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 TTC13Q8NBP0 860 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 USP29Q9HBJ7 922 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 DTLQ9NZJ0 730 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 SLC12A6Q9UHW9 1150 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 DPYSL4O14531 572 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 ARL4AP40617 200 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 APLP1P51693 650 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 GPX6P59796 221 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 NCBP2-AS2Q69YL0 99 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 RWDD4Q6NW29 188 aaKnown RBP18.26■□□□□ 0.51
NPAS3-202ENST00000356141 TRAF7Q6Q0C0 670 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 C3orf62Q6ZUJ4 267 aa18.26■□□□□ 0.51
NPAS3-202ENST00000356141 MRPL10Q7Z7H8 261 aaKnown RBP18.26■□□□□ 0.51
NPAS3-202ENST00000356141 ABI1Q8IZP0 508 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms