RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 KCNA10Q16322 511 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 FAM183BPQ6ZVS7 135 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 FAM71AQ8IYT1 594 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 MDM1Q8TC05 714 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 UBE2OQ9C0C9 1292 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 TBC1D13Q9NVG8 400 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 THG1LQ9NWX6 298 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 TPH1P17752 444 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 POU4F1Q01851 419 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 POU6F1Q14863 301 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 ZNF284Q2VY69 593 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 ZNF473Q8WTR7 871 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 NAT9Q9BTE0 207 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 KCNK1O00180 336 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SOAT2O75908 522 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 LMNAP02545 664 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 ASGR1P07306 291 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 GLI1P08151 1106 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SERPINF2P08697 491 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 ITGALP20701 1170 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 KCNA4P22459 653 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 CTNNB1P35222 781 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 PRKCIP41743 596 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 BSNDQ8WZ55 320 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 MYLPFQ96A32 169 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 TMA16Q96EY4 203 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 TLR10Q9BXR5 811 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 ASPSCR1Q9BZE9 553 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 PIH1D1Q9NWS0 290 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SPTLC1O15269 473 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 VPS26AO75436 327 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 RARAP10276 462 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 PYGBP11216 843 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 MTFR1Q15390 333 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 AGAP9Q5VTM2 703 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 STRA8Q7Z7C7 330 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 CDYLQ9Y232 598 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 DRG1Q9Y295 367 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 O00370 1275 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 PJA2O43164 708 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SMPD1P17405 629 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 MAMLD1Q13495 774 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 SPDYE7PQ495Y7 208 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 WNT8BQ93098 351 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 HIPK3Q9H422 1215 aa15.34■□□□□ 0.05
COL17A1-201ENST00000353479 TRIM45Q9H8W5 580 aaPredicted RBP15.34■□□□□ 0.05
COL17A1-201ENST00000353479 FRMD3A2A2Y4 597 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 PBLDP30039 288 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-201ENST00000353479 NOS2P35228 1153 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 MAP2K2P36507 400 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 RENBPP51606 427 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 PTAR1Q7Z6K3 402 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-201ENST00000353479 PIGZQ86VD9 579 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 KIRREL3Q8IZU9 778 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 ANKRD7Q92527 254 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 SHCBP1LQ9BZQ2 653 aa15.33■□□□□ 0.05
COL17A1-201ENST00000353479 RUVBL2Q9Y230 463 aaKnown RBP15.33■□□□□ 0.05
COL17A1-201ENST00000353479 USP15Q9Y4E8 981 aaPredicted RBP15.33■□□□□ 0.05
COL17A1-201ENST00000353479 NCF1BA6NI72 391 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 NCF1CA8MVU1 366 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 NT5C1B-RDH14C9J2C7 533 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 NCF1P14598 390 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 RPL9P32969 192 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 PLA2G4AP47712 749 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 ACAP1Q15027 740 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 FIBCD1Q8N539 461 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 FAM167BQ9BTA0 163 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 CLPBQ9H078 707 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 IGLV3-22A0A075B6J6 115 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 TIMM44O43615 452 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 GRIK3Q13003 919 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 MTA1Q13330 715 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 C18orf25Q96B23 403 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 MFSD14AQ96MC6 490 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 PAFAH2Q99487 392 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 MRPL46Q9H2W6 279 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 RNF112Q9ULX5 631 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 SLC27A5Q9Y2P5 690 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 SIGLEC16A6NMB1 481 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 STMN1P16949 149 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 DDX5P17844 614 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 MZF1P28698 734 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 ATP5C1P36542 298 aaKnown RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 GLRBP48167 497 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 SERPINB8P50452 374 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 TRIM48Q8IWZ4 208 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 ZBTB10Q96DT7 871 aa15.33■□□□□ 0.04
COL17A1-201ENST00000353479 CICQ96RK0 1608 aaPredicted RBP15.33■□□□□ 0.04
COL17A1-201ENST00000353479 SCAMP3O14828 347 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms