RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 C2orf81A6NN90 581 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 TLL1O43897 1013 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 RFWD2Q8NHY2 731 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 TMA16Q96EY4 203 aaKnown RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 FAM111AQ96PZ2 611 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 ADA2Q9NZK5 511 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMC6-201ENST00000351948 C1orf127Q8N9H9 656 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 CALML6Q8TD86 181 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.13□□□□□ -0.151e-8■■■■■ 39.9
SMC6-201ENST00000351948 WNT8BQ93098 351 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 AVENQ9NQS1 362 aaPredicted RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 DOLKQ9UPQ8 538 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 OPHN1O60890 802 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 PBLDP30039 288 aaPredicted RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 NOMO3P69849 1222 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 MBTD1Q05BQ5 628 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 TIGD7Q6NT04 549 aaPredicted RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 TSHZ1Q6ZSZ6 1077 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 HERC6Q8IVU3 1022 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 TSSK1BQ9BXA7 367 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 GIT1Q9Y2X7 761 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 HMOX2P30519 316 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 CLCNKBP51801 687 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 HTRA3P83110 453 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 DUSP4Q13115 394 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 ZDHHC17Q8IUH5 632 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 PCDHA2Q9Y5H9 948 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 RNF103O00237 685 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 RPSAP08865 295 aaKnown RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 SELPP16109 830 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 KCNA3P22001 575 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 PBX3P40426 434 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 SERPINB9P50453 376 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 SNCBQ16143 134 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 PSMD5Q16401 504 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 FSCBQ5H9T9 825 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 LRRC8DQ7L1W4 858 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 ANKRD52Q8NB46 1076 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 SFMBT1Q9UHJ3 866 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 SMG5Q9UPR3 1016 aaKnown RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 CFAP99D6REC4 459 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 RPL21P46778 160 aaKnown RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 OVGP1Q12889 678 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 TMEM192Q8IY95 271 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 TSPAN17Q96FV3 270 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 PCDHB18PQ96TA0 734 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 ETNK1Q9HBU6 452 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 FGFR1OP2Q9NVK5 253 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 SRP72O76094 671 aaKnown RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 RTN3O95197 1032 aaPredicted RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 MYL2P10916 166 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 GRIK3Q13003 919 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 DNAJC3Q13217 504 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 TUSC3Q13454 348 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 TTC39BQ5VTQ0 682 aaPredicted RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 LCA5Q86VQ0 697 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 TBCBQ99426 244 aa14.12□□□□□ -0.15
SMC6-201ENST00000351948 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
SMC6-201ENST00000351948 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 RALBP11234 206 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 HDCP19113 662 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 NOS2P35228 1153 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ATP5C1P36542 298 aaKnown RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 ARHGAP1Q07960 439 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 DAW1Q8N136 415 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 DBF4BQ8NFT6 615 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 JOSD2Q8TAC2 188 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SNRNP25Q9BV90 132 aaKnown RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 FOXP3Q9BZS1 431 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PDE2AO00408 941 aaPredicted RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 ZNF189O75820 626 aaPredicted RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 ACRP10323 421 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ITGB6P18564 788 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 KDELR1P24390 212 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 USP41Q3LFD5 358 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 POM121L1PQ3SYA9 428 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 UCMAQ8WVF2 138 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 RUBCNQ92622 972 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 FOPNLQ96NB1 174 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 CYP4F12Q9HCS2 524 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 UTP6Q9NYH9 597 aaKnown RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 ZNF197O14709 1029 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 TRIM66O15016 1216 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ADCY6O43306 1168 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 CAND2O75155 1236 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SPAG6O75602 509 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 C22orf31O95567 290 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PYGLP06737 847 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 FAM153BP0C7A2 387 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms