RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 INAVAQ3KP66 663 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 PRR23BQ6ZRT6 265 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 ANKS1BQ7Z6G8 1248 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 MYO1HQ8N1T3 1032 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 GJA10Q969M2 543 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 TMEM79Q9BSE2 394 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 FRMD8Q9BZ67 464 aaPredicted RBP11□□□□□ -0.65
CAPN3-203ENST00000349748 C20orf27Q9GZN8 174 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 HOXD1Q9GZZ0 328 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 SMARCAD1Q9H4L7 1026 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 DNMT3BQ9UBC3 853 aaKnown RBP11□□□□□ -0.65
CAPN3-203ENST00000349748 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 POLIQ9UNA4 740 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 BCS1LQ9Y276 419 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 TRAF6Q9Y4K3 522 aa11□□□□□ -0.65
CAPN3-203ENST00000349748 TAF4O00268 1085 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 KCNH1O95259 989 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 MYCP01106 439 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 AOC1P19801 751 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ETFBP38117 255 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 DYNLL1P63167 89 aaKnown RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 PHC1P78364 1004 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 TMPRSS15P98073 1019 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 GSTA5Q7RTV2 222 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 PAFAH2Q99487 392 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 RTFDC1Q9BY42 306 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 NYXQ9GZU5 481 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 IRF2BPLQ9H1B7 796 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 NOL6Q9H6R4 1146 aaKnown RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 FANCEQ9HB96 536 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ILVBLA1L0T0 632 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 H7C0C1 242 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 JRKO75564 520 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 DDAH1O94760 285 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 UFL1O94874 794 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ERBB2P04626 1255 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 SERPINA6P08185 405 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 DHRS4L1P0CG22 281 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ETS1P14921 441 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 CES1P23141 567 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 HPCAL1P37235 193 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 PRAMEP78395 509 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 AGAP7PQ5VUJ5 663 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 SLC51AQ86UW1 340 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 CCDC33Q8N5R6 958 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ADCY4Q8NFM4 1077 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ACDQ96AP0 544 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 SERAC1Q96JX3 654 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 ZNF641Q96N77 438 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-203ENST00000349748 SLC29A1Q99808 456 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 SEMA6AQ9H2E6 1030 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 C12orf4Q9NQ89 552 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 POLE4Q9NR33 117 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 HOXC10Q9NYD6 342 aa10.99□□□□□ -0.65
CAPN3-203ENST00000349748 GOLGA8IPA6NC78 632 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 I3L4J1 428 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 HOXC11O43248 304 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CSPG5O95196 566 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 BMP10O95393 424 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 FGFR3P22607 806 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 POLR2BP30876 1174 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 GPX6P59796 221 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PPP2R2BQ00005 443 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PMS2P3Q13401 168 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CDHR3Q6ZTQ4 885 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 FRMD7Q6ZUT3 714 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CHSY1Q86X52 802 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SLC35C1Q96A29 364 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 TCF12Q99081 682 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 INO80BQ9C086 356 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 IFT122Q9HBG6 1241 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SSU72Q9NP77 194 aaKnown RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SLC24A2Q9UI40 661 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SPEF1Q9Y4P9 236 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CICQ96RK0 1608 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 CYB561D2O14569 222 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 RGS13O14921 159 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 ETV3P41162 512 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SLC1A1P43005 524 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 P2RX3P56373 397 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 GPC5P78333 572 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 TFAP4Q01664 338 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PRR5LQ6MZQ0 368 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SYDE1Q6ZW31 735 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 RNF148Q8N7C7 305 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 GTF3C4Q9UKN8 822 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-203ENST00000349748 SDR42E2A6NKP2 422 aa10.98□□□□□ -0.65
CAPN3-203ENST00000349748 A8MX80 341 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms