RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 COL19A1Q14993 1142 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 C10orf120Q5SQS8 335 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 MEI1Q5TIA1 1274 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 SYT10Q6XYQ8 523 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 CYP4V2Q6ZWL3 525 aaPredicted RBP19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 RSRC2Q7L4I2 434 aaKnown RBP19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 STRADAQ7RTN6 431 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 SYCE1Q8N0S2 351 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 ZNF276Q8N554 614 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 KRT35Q92764 455 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 CYP2S1Q96SQ9 504 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 TRIM62Q9BVG3 475 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 ATXN3LQ9H3M9 355 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 FAM204AQ9H8W3 233 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 PIDD1Q9HB75 910 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 TRPC7Q9HCX4 862 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 WDR6Q9NNW5 1121 aaKnown RBP19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 DDIT4Q9NX09 232 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 CLDND1Q9NY35 253 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 PCSK1NQ9UHG2 260 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 RASAL2Q9UJF2 1139 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 AMFRQ9UKV5 643 aa19.81■□□□□ 0.76
CHMP4A-201ENST00000347519 IRAK2O43187 625 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 SPOPO43791 374 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 ATP1A1P05023 1023 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 CDC25CP30307 473 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC25A11Q02978 314 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 DEUP1Q05D60 604 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 TEAD2Q15562 447 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 ATP13A4Q4VNC1 1196 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 PABPC1LQ4VXU2 614 aaKnown RBP19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 PDZD4Q76G19 769 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 PEX26Q7Z412 305 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 GPR149Q86SP6 731 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 ITFG1Q8TB96 612 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 PGAP3Q96FM1 320 aaPredicted RBP19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 TLR10Q9BXR5 811 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 MAGEB5Q9BZ81 275 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 S1PR5Q9H228 398 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 ANLNQ9NQW6 1124 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 TMPRSS4Q9NRS4 437 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 RRN3Q9NYV6 651 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 DNAI1Q9UI46 699 aa19.8■□□□□ 0.76
CHMP4A-201ENST00000347519 I6L893 689 aaPredicted RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 DDX3YO15523 660 aaKnown RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 RNF8O76064 485 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 CEBPBP17676 345 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 RDXP35241 583 aaKnown RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC1A1P43005 524 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 SSR1P43307 286 aaKnown RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 DNA2P51530 1060 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 ACAP1Q15027 740 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 FAM131BQ86XD5 332 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 MIB1Q86YT6 1006 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 CCDC185Q8N715 623 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 ARL14EPQ8N8R7 260 aaPredicted RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 MRPS31Q92665 395 aaKnown RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 ACSF2Q96CM8 615 aaPredicted RBP19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC46A2Q9BY10 475 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 MARCH2Q9P0N8 246 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 LCMT1Q9UIC8 334 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 A0A0C4DFX4 3053 aa19.79■□□□□ 0.76
CHMP4A-201ENST00000347519 EYSQ5T1H1 3165 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 OLFM2O95897 454 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 PCK1P35558 622 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 GJC1P36383 396 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 ATP5C1P36542 298 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 TUBP50607 506 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 SCYL2Q6P3W7 929 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 EP400NLQ6ZTU2 488 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 MAB21L3Q8N8X9 362 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 ING5Q8WYH8 240 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 WBP2Q969T9 261 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 HES6Q96HZ4 224 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 MSLNLQ96KJ4 702 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 FCRL2Q96LA5 508 aaPredicted RBP19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 GCNAQ96QF7 691 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 ZWILCHQ9H900 591 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 OLA1Q9NTK5 396 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 GPATCH2LQ9NWQ4 482 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 USP18Q9UMW8 372 aa19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 HELZP42694 1942 aaKnown RBP19.78■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC12A8A0AV02 714 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 HMBSP08397 361 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 SRGAP2BP0DMP2 458 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 CTNNA2P26232 953 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 CXCR3P49682 368 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 PEX5P50542 639 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 ZXDBP98169 803 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 CCDC85BQ15834 202 aaPredicted RBP19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 ZC3H12AQ5D1E8 599 aaKnown RBP19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 GPR158Q5T848 1215 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 KLHDC10Q6PID8 442 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 LEMD2Q8NC56 503 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 ALG3Q92685 438 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 PABPC5Q96DU9 382 aaKnown RBP19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 SLC39A13Q96H72 371 aa19.77■□□□□ 0.76
CHMP4A-201ENST00000347519 ZFRQ96KR1 1074 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms