RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 ARCQ7LC44 396 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 TRPM8Q7Z2W7 1104 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 CAND1Q86VP6 1230 aaKnown RBP13.18□□□□□ -0.3
RNF13-201ENST00000344229 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
RNF13-201ENST00000344229 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
RNF13-201ENST00000344229 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF13-201ENST00000344229 FETUBQ9UGM5 382 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 Q9Y3F1 56 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
RNF13-201ENST00000344229 TCRBV9S1A1TA0A576 114 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 METTL18O95568 372 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 ZBED1O96006 694 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 C1QAP02745 245 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 GHRP10912 638 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 SNX16P57768 344 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 YWHAZP63104 245 aaKnown RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 PRPF39Q86UA1 669 aaKnown RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 NME8Q8N427 588 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 ACTR5Q9H9F9 607 aaPredicted RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.17□□□□□ -0.3
RNF13-201ENST00000344229 PAK5Q9P286 719 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 SMAPO00193 183 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 CYB561D2O14569 222 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 GOT1P17174 413 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 AMPD1P23109 780 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 LRPAP1P30533 357 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 SLC18A1P54219 525 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 IL9RQ01113 521 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 MGAT5Q09328 741 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 PARP9Q8IXQ6 854 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 HSFY1Q96LI6 401 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
RNF13-201ENST00000344229 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
RNF13-201ENST00000344229 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 SCNN1AP37088 669 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 RGS2P41220 211 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 RAB27AP51159 221 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 MTFR1Q15390 333 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 NCBP2-AS2Q69YL0 99 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 SPATA21Q7Z572 469 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 MAB21L3Q8N8X9 362 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 LPPQ93052 612 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 TRIM56Q9BRZ2 755 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 SLCO1B3Q9NPD5 702 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 ZNF487B1APH4 448 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 RARBP10826 455 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 EZRP15311 586 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 CA4P22748 312 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 MATKP42679 507 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 ACADSBP45954 432 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 DNAJC3Q13217 504 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 KLHL38Q2WGJ6 581 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 FAM133BQ5BKY9 247 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 ZNF534Q76KX8 674 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 RMDN2Q96LZ7 410 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 APBA2Q99767 749 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 FZD10Q9ULW2 581 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 SMG5Q9UPR3 1016 aaKnown RBP13.16□□□□□ -0.3
RNF13-201ENST00000344229 CDY2AQ9Y6F7 541 aa13.16□□□□□ -0.3
RNF13-201ENST00000344229 GABRDO14764 452 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 FAM155BO75949 473 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 MLH1P40692 756 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 MSH2P43246 934 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 CBLBQ13191 982 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 RBBP5Q15291 538 aaKnown RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 SYPL2Q5VXT5 272 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 GDF6Q6KF10 455 aaPredicted RBP13.15□□□□□ -0.3
RNF13-201ENST00000344229 CYB5D1Q6P9G0 228 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.3
RNF13-201ENST00000344229 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms