RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TTC23LQ6PF05 361 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 SETD3Q86TU7 594 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 TTC30AQ86WT1 665 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PPIL6Q8IXY8 311 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 DEFB107AQ8IZN7 70 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 TAMM41Q96BW9 452 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 C12orf43Q96C57 262 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF641Q96N77 438 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 UGT1A7Q9HAW7 530 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 UGT1A10Q9HAW8 530 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 UGT1A8Q9HAW9 530 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 MRPL40Q9NQ50 206 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 HACL1Q9UJ83 578 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PLIN4Q96Q06 1357 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 POLRMTO00411 1230 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 LIASO43766 372 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 IDH3BO43837 385 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 SNNO75324 88 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 TPPPO94811 219 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ITGAXP20702 1163 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 DCKP27707 260 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 EPHX2P34913 555 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 CASP5P51878 434 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 UBAP2LQ14157 1087 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 FLOT2Q14254 428 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ACAP1Q15027 740 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 TEX44Q53QW1 395 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 C6orf52Q5T4I8 152 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 FAAH2Q6GMR7 532 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ITPRIPL1Q6GPH6 555 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 EEPD1Q7L9B9 569 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 CARM1Q86X55 608 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 NUDCD3Q8IVD9 361 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 MMAAQ8IVH4 418 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PALM2Q8IXS6 379 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 COLGALT2Q8IYK4 626 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF597Q96LX8 424 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 MAGEE1Q9HCI5 957 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 UBE2TQ9NPD8 197 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 MAN1C1Q9NR34 630 aa8.39□□□□□ -1.07
ATG4A-201ENST00000343524 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 NOCTQ9UK39 431 aaKnown RBP8.39□□□□□ -1.07
ATG4A-201ENST00000343524 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 DENND3A2RUS2 1198 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TBKBP1A7MCY6 615 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TTC34A8MYJ7 566 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 FAM155AB1AL88 458 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 E7ESA3 106 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 RGS13O14921 159 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 XPO1O14980 1071 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 SLC22A1O15245 554 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 PMM2O15305 246 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 KRT6AP02538 564 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 KRT6BP04259 564 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TFPTP0C1Z6 253 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 RPA1P27694 616 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TM4SF1P30408 202 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 L1CAMP32004 1257 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TNNI2P48788 182 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 HSD17B4P51659 736 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 MFAP3P55082 362 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 GPX6P59796 221 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 DYNLL1P63167 89 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 KRT76Q01546 638 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TFDP1Q14186 410 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 FASTKD3Q14CZ7 662 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 CHI3L2Q15782 390 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 AGAP7PQ5VUJ5 663 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 CST9Q5W186 159 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 ACAD10Q6JQN1 1059 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 MOXD1Q6UVY6 613 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 LINC00299Q6ZSB3 139 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 NEK10Q6ZWH5 1172 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 PDIK1LQ8N165 341 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 HIPK4Q8NE63 616 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 PIWIL2Q8TC59 973 aaKnown RBP8.38□□□□□ -1.07
ATG4A-201ENST00000343524 SLC44A1Q8WWI5 657 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 GJA10Q969M2 543 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 MED30Q96HR3 178 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 HHIPL1Q96JK4 782 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 TUBA1CQ9BQE3 449 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 MROQ9BYG7 248 aa8.38□□□□□ -1.07
ATG4A-201ENST00000343524 ANKRD60Q9BZ19 345 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms