RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 Q3C1V9 767 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 SETD3Q86TU7 594 aaPredicted RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 TMPRSS6Q8IU80 811 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 BTBD7Q9P203 1132 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 GOLGA8CPA6NN73 597 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 MYL3P08590 195 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 ETS1P14921 441 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 ETS2P15036 469 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 JAG1P78504 1218 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 CATSPER1Q8NEC5 780 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 ATP9BO43861 1147 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 B4GALT4O60513 344 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 PIGRP01833 764 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 INSRRP14616 1297 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 CYP2F1P24903 491 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 CDH8P55286 799 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 MAPRE2Q15555 327 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 STKLD1Q8NE28 680 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 PWWP2AQ96N64 755 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 SLC38A7Q9NVC3 462 aa12.1□□□□□ -0.47
TRAK1-202ENST00000341421 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
TRAK1-202ENST00000341421 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CLPTM1O96005 669 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 PGK2P07205 417 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CDK16Q00536 496 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TSPY1Q01534 308 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SMAD1Q15797 465 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CNGA3Q16281 694 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 MDH1BQ5I0G3 518 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 JADE1Q6IE81 842 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 VSTM1Q6UX27 236 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 ASRGL1Q7L266 308 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CCDC124Q96CT7 223 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CYP4F11Q9HBI6 524 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 GPATCH2LQ9NWQ4 482 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 MYH7BA7E2Y1 1941 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 EDIL3O43854 480 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TRUB2O95900 331 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 APOEP02649 317 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 VAV1P15498 845 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CREB1P16220 341 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SLC6A3Q01959 620 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 ZSWIM2Q8NEG5 633 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 GPR88Q9GZN0 384 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TMEM165Q9HC07 324 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 LRRC4CQ9HCJ2 640 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 HACD1B0YJ81 288 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 H2AFYO75367 372 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CYP2C9P11712 490 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 GNAZP19086 355 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TNFSF9P41273 254 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SERPINB8P50452 374 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 COPAP53621 1224 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 NAB1Q13506 487 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CD101Q93033 1021 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 AGAP3Q96P47 875 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 ECSITQ9BQ95 431 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CDT1Q9H211 546 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 MAGEA8P43361 318 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CDK7P50613 346 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 SCNN1BP51168 640 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 POU5F1Q01860 360 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 NAPEPLDQ6IQ20 393 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 CCNYL1Q8N7R7 359 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 ZNF669Q96BR6 464 aaPredicted RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 KLHL4Q9C0H6 718 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
TRAK1-202ENST00000341421 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
TRAK1-202ENST00000341421 ZNF536O15090 1300 aa12.08□□□□□ -0.48
TRAK1-202ENST00000341421 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
TRAK1-202ENST00000341421 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
TRAK1-202ENST00000341421 KRT80Q6KB66 452 aa12.08□□□□□ -0.48
TRAK1-202ENST00000341421 LLGL2Q6P1M3 1020 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms