RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 M0R3G1 203 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TPP1O14773 563 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 CYP2C8P10632 490 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TRIM16LQ309B1 348 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 SEMA6AQ9H2E6 1030 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 A0A096LPK6 155 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 EME2A4GXA9 379 aaPredicted RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 C19orf81C9J6K1 198 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 AVILO75366 819 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 PPARGP37231 505 aaPredicted RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 LBRQ14739 615 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 C16orf72Q14CZ0 275 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 PDK3Q15120 406 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 KIZQ2M2Z5 673 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 KYAT3Q6YP21 454 aaKnown RBP15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TUBGCP3Q96CW5 907 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 ETNK2Q9NVF9 386 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 DDIT4Q9NX09 232 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 GGA3Q9NZ52 723 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 ACOT9Q9Y305 439 aa15.26■□□□□ 0.03
RRP1B-201ENST00000340648 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 HBP1O60381 514 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ABCG1P45844 678 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CRADDP78560 199 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CYP2R1Q6VVX0 501 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CALML6Q8TD86 181 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 LRRN4Q8WUT4 740 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ASPSCR1Q9BZE9 553 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NMUR2Q9GZQ4 415 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 VANGL2Q9ULK5 521 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 TCRBV9S1A1TA0A576 114 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 PTPN7P35236 360 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 GSTA3Q16772 222 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 SHROOM1Q2M3G4 852 aaPredicted RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 AASDHQ4L235 1098 aaPredicted RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 SHCBP1Q8NEM2 672 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ZNF384Q8TF68 577 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 RMND5BQ96G75 393 aaPredicted RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 MAGEB2O15479 319 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 PRPF4O43172 522 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■■□ 24.7
RRP1B-201ENST00000340648 PEX1O43933 1283 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 AMPD1P23109 780 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ME2P23368 584 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NEK2P51955 445 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 ACVR2BQ13705 512 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 C15orf59Q2T9L4 293 aaPredicted RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NIPA1Q7RTP0 329 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 PLD3Q8IV08 490 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 BRSK2Q8IWQ3 736 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 GSTCDQ8NEC7 633 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CPB2Q96IY4 423 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CACYBPQ9HB71 228 aaKnown RBP15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 KIAA1257Q9ULG3 409 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NR5A2O00482 541 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 TPH1P17752 444 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 HMOX2P30519 316 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NDST1P52848 882 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 PLIN5Q00G26 463 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 CCDC153Q494R4 210 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 DCAF12L1Q5VU92 463 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 KCNT2Q6UVM3 1135 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 HTR3CQ8WXA8 447 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 DACH2Q96NX9 599 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 RUBCNLQ9H714 662 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 FMN2Q9NZ56 1722 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 NCKIPSDQ9NZQ3 722 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 BTBD7Q9P203 1132 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 TMEM59LQ9UK28 342 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 PCDHAC2Q9Y5I4 1007 aa15.25■□□□□ 0.03
RRP1B-201ENST00000340648 HEATR9A2RTY3 570 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 SLCO1B7G3V0H7 640 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 LGR5O75473 907 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
RRP1B-201ENST00000340648 MLH1P40692 756 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 NRF1Q16656 503 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 AGAP9Q5VTM2 703 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 LINC00523Q86TU6 105 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 PHF13Q86YI8 300 aaPredicted RBP15.24■□□□□ 0.03
RRP1B-201ENST00000340648 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 CYP4X1Q8N118 509 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 SH3TC2Q8TF17 1288 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 CLPTM1LQ96KA5 538 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 ZCWPW1Q9H0M4 648 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 ARHGEF3Q9NR81 526 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 CHKBQ9Y259 395 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 PRR5-ARHGAP8B1AHC4 643 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 ATP5BP06576 529 aaKnown RBP15.24■□□□□ 0.03
RRP1B-201ENST00000340648 RGS2P41220 211 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 ARHGAP8P85298 464 aa15.24■□□□□ 0.03
RRP1B-201ENST00000340648 LAMTOR4Q0VGL1 99 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms