RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CCND3P30281 292 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CIITAP33076 1130 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C16orf72Q14CZ0 275 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 SF3B4Q15427 424 aaKnown RBP eCLIP5.79□□□□□ -1.483e-8■■■□□ 18.4
CSDE1-202ENST00000339438 ABCB5Q2M3G0 1257 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 FASTKD5Q7L8L6 764 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TRMT1LQ7Z2T5 733 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 FRMD5Q7Z6J6 570 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 BPHLQ86WA6 291 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CHSY1Q86X52 802 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC105Q8IYK2 499 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 LSM14AQ8ND56 463 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC127Q96BQ5 260 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 PIGSQ96S52 555 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 GPATCH1Q9BRR8 931 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 THTPAQ9BU02 230 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 INO80BQ9C086 356 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C20orf27Q9GZN8 174 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 RPAP3Q9H6T3 665 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 SIAEQ9HAT2 523 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 IGSF9Q9P2J2 1179 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 EBF1Q9UH73 591 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 KLHL3Q9UH77 587 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 INPP5FQ9Y2H2 1132 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ANKRD34BA5PLL1 514 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 GOLGA8TH3BQL2 631 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 BAG2O95816 211 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 MYL2P10916 166 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ATP6V1B1P15313 513 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 HMGCS2P54868 508 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 GPX6P59796 221 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 KCNC3Q14003 757 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 KCNJ8Q15842 424 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 RNF207Q6ZRF8 634 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 AMIGO2Q86SJ2 522 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 GPR180Q86V85 440 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CHERPQ8IWX8 916 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CASP10Q92851 521 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 EFHD2Q96C19 240 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 MTBPQ96DY7 904 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF641Q96N77 438 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C16orf70Q9BSU1 422 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 NRDE2Q9H7Z3 1164 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 MANSC1Q9H8J5 431 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 BARHL2Q9NY43 387 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 RIMS3Q9UJD0 308 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ZHX2Q9Y6X8 837 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ARHGAP10A1A4S6 786 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 GTPBP10A4D1E9 387 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TNFRSF10AO00220 468 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 KLF11O14901 512 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 INPPL1O15357 1258 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TNFAIP8O95379 198 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C8BP07358 591 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 DLATP10515 647 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ENDOUP21128 410 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TKTP29401 623 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 SOX5P35711 763 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TNNI2P48788 182 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 NDST2P52849 883 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 NAPAP54920 295 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ARPC4P59998 168 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 PDAP1Q13442 181 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF829Q3KNS6 432 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TEX44Q53QW1 395 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 RALGPS1Q5JS13 557 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 HYIQ5T013 277 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C1orf146Q5VVC0 180 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 LILRA2Q8N149 483 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ZCCHC9Q8N567 271 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 POU5F2Q8N7G0 328 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 LMO3Q8TAP4 145 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TCP10LQ8TDR4 215 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 C1orf54Q8WWF1 131 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 ATG4AQ8WYN0 398 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 WNT8BQ93098 351 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 PLEKHA8Q96JA3 519 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 PSD2Q9BQI7 771 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 TRNAU1APQ9NX07 287 aaKnown RBP5.79□□□□□ -1.48
CSDE1-202ENST00000339438 MAD1L1Q9Y6D9 718 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 CITO14578 2027 aa5.79□□□□□ -1.48
CSDE1-202ENST00000339438 SLC37A4O43826 429 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 DKC1O60832 514 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 BAIAP3O94812 1187 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 KRT4P19013 534 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 AOC1P19801 751 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 CA4P22748 312 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 L1CAMP32004 1257 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ARHGAP1Q07960 439 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 EFHC2Q5JST6 749 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 EFHC1Q5JVL4 640 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 RABGAP1LQ5R372 815 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 FYB2Q5VWT5 728 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 PCNX4Q63HM2 1172 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ATG14Q6ZNE5 492 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 EEPD1Q7L9B9 569 aa5.78□□□□□ -1.48
CSDE1-202ENST00000339438 IFNLR1Q8IU57 520 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF713Q8N859 430 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms