RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 AMACRQ9UHK6 382 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 C5orf67F2Z3F1 127 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RAD51CO43502 376 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 IGLV3-25P01717 112 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 L1CAMP32004 1257 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GBP1P32455 592 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CYP1B1Q16678 543 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PYROXD2Q8N2H3 581 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ATG4AQ8WYN0 398 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM118BQ9BPY3 351 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PARD6BQ9BYG5 372 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FBXW11Q9UKB1 542 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 EFR3BQ9Y2G0 817 aa15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 R3HDM2Q9Y2K5 976 aaKnown RBP15.33■□□□□ 0.05
CDK5RAP3-201ENST00000338399 HIDE1A8MVS5 230 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TGM5O43548 720 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CST8O60676 142 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RARGP13631 454 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CXCR3P49682 368 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DYNLT1P63172 113 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TWF1Q12792 350 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SNX1Q13596 522 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DPYSL2Q16555 572 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 KCTD19Q17RG1 926 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TTC27Q6P3X3 843 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM71BQ8TC56 605 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RNF34Q969K3 372 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PNKPQ96T60 521 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MAK16Q9BXY0 300 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SMOC2Q9H3U7 446 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SLITRK6Q9H5Y7 841 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 WDCPQ9H6R7 721 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ANLNQ9NQW6 1124 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TLR9Q9NR96 1032 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MTMR10Q9NXD2 777 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DMGDHQ9UI17 866 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 INSL5Q9Y5Q6 135 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 IRAK3Q9Y616 596 aa15.33■□□□□ 0.04
CDK5RAP3-201ENST00000338399 C2orf71A6NGG8 1288 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GRM6O15303 877 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 IRAK2O43187 625 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MSI1O43347 362 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RB1P06400 928 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ADH1AP07327 375 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CSH1P0DML2 217 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CSH2P0DML3 217 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HMGA1P17096 107 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 IL4RP24394 825 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 KLRC2P26717 231 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CHRNA3P32297 505 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ADRA1BP35368 520 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 COILP38432 576 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PSEN1P49768 467 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 UBE3AQ05086 875 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EIF4EBP2Q13542 120 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TAF12Q16514 161 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCDC137Q6PK04 289 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MRPL43Q8N983 215 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 C12orf50Q8NA57 414 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MICAL1Q8TDZ2 1067 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 HAUS1Q96CS2 278 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RNF157Q96PX1 679 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EMILIN2Q9BXX0 1053 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 DCLK3Q9C098 648 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 LRRC19Q9H756 370 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■□□□□ 8
CDK5RAP3-201ENST00000338399 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MAFFQ9ULX9 164 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 YBX2Q9Y2T7 364 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PCDHA11Q9Y5I1 949 aa15.32■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TTI1O43156 1089 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZMYND10O75800 440 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZDHHC11BP0C7U3 371 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PBX2P40425 430 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 KCNJ1P48048 391 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 VEPH1Q14D04 833 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ARL13BQ3SXY8 428 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ANKRD20A8PQ5CZ79 823 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EFHC2Q5JST6 749 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MSANTD2Q6P1R3 559 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 NTAN1Q96AB6 310 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TKTL2Q9H0I9 626 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SAE1Q9UBE0 346 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MTCL1Q9Y4B5 1905 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 TBX18O95935 607 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 IRS1P35568 1242 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EPHB3P54753 998 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 AIF1P55008 147 aa15.31■□□□□ 0.04
CDK5RAP3-201ENST00000338399 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms