RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSMD2-202ENST00000338325 PLK2Q9NYY3 685 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 DNMT3LQ9UJW3 386 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 FBXO10Q9UK96 956 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 SLC27A6Q9Y2P4 619 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 PCDHA5Q9Y5H7 936 aa12.11□□□□□ -0.47
CSMD2-202ENST00000338325 TP53BP1Q12888 1972 aaPredicted RBP12.1□□□□□ -0.47
CSMD2-202ENST00000338325 A0A1W2PQH9 124 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 CER1O95813 267 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 RARGP13631 454 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 TRIM21P19474 475 aaKnown RBP12.1□□□□□ -0.47
CSMD2-202ENST00000338325 OXTRP30559 389 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 IL12RB1P42701 662 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 SGSM1Q2NKQ1 1148 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 CLEC20AQ6ZU45 233 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 SETD7Q8WTS6 366 aaKnown RBP12.1□□□□□ -0.47
CSMD2-202ENST00000338325 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 TAF4BQ92750 862 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 JAKMIP2Q96AA8 810 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
CSMD2-202ENST00000338325 MIR1-1HGQ9H1L0 117 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
CSMD2-202ENST00000338325 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 CUTAO60888 179 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 STC2O76061 302 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 PENKP01210 267 aaPredicted RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 ACO1P21399 889 aaKnown RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 CASP1P29466 404 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 MATKP42679 507 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 ASPAP45381 313 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 PSEN1P49768 467 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 TPMTP51580 245 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 MFAP3P55082 362 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 ENPP2Q13822 863 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 SOWAHCQ53LP3 525 aaPredicted RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 IL27RAQ6UWB1 636 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 TADA2BQ86TJ2 420 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 BAHD1Q8TBE0 780 aaPredicted RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 HNRNPABQ99729 332 aaKnown RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 GAREM1Q9H706 876 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 PNPLA8Q9NP80 782 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 TM7SF3Q9NS93 570 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 KIAA1522Q9P206 1035 aaPredicted RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 THAP10Q9P2Z0 257 aaPredicted RBP12.09□□□□□ -0.47
CSMD2-202ENST00000338325 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
CSMD2-202ENST00000338325 MUC22E2RYF6 1773 aaPredicted RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 METTL12A8MUP2 240 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 BCAT2O15382 392 aaPredicted RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 STX6O43752 255 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 SYNCRIPO60506 623 aaKnown RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 CILPO75339 1184 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 ASS1P00966 412 aaKnown RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 CHKAP35790 457 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 DLG4P78352 724 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 BNC1Q01954 994 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 E2F5Q15329 346 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 GEN1Q17RS7 908 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 ZACNQ401N2 412 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 SPOPLQ6IQ16 392 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 ANKS1BQ7Z6G8 1248 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 TMPRSS6Q8IU80 811 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 ZNF276Q8N554 614 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 PRCCQ92733 491 aaPredicted RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 FNDC3AQ9Y2H6 1198 aaKnown RBP12.08□□□□□ -0.48
CSMD2-202ENST00000338325 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
CSMD2-202ENST00000338325 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
CSMD2-202ENST00000338325 FLRT2O43155 660 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 YEATS4O95619 227 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 KLKB1P03952 638 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 RALAP11233 206 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 ACADMP11310 421 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 PIK3CAP42336 1068 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 KIF11P52732 1056 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 COPAP53621 1224 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CUL4BQ13620 913 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 ZNF234Q14588 700 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 HLA-BQ31612 363 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
CSMD2-202ENST00000338325 CCDC186Q7Z3E2 898 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms