RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TTC7BQ86TV6 843 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SHKBP1Q8TBC3 707 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 CCDC97Q96F63 343 aaPredicted RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 FAM161BQ96MY7 647 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 WDR83Q9BRX9 315 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 ANK1P16157 1881 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 PENKP01210 267 aaPredicted RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 LMNAP02545 664 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 RBP3P10745 1247 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 MARK2Q7KZI7 788 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 OTOAQ7RTW8 1153 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SESTD1Q86VW0 696 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 CEP70Q8NHQ1 597 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 FBXO27Q8NI29 283 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 MAML1Q92585 1016 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 MRPL45Q9BRJ2 306 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 MROH8Q9H579 483 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 SNTG2Q9NY99 539 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 NR2E3Q9Y5X4 410 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SCN1AP35498 2009 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 PDLIM1O00151 329 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ADCY6O43306 1168 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 TSPAN1O60635 241 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 IL18RAPO95256 599 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 EPHX2P34913 555 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 RPA3P35244 121 aaPredicted RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 CDK7P50613 346 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 STAT4Q14765 748 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 SLC1A5Q15758 541 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 NKD2Q969F2 451 aaPredicted RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 HAPLN3Q96S86 360 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 TRABDQ9H4I3 376 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 KLK14Q9P0G3 267 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 LOC285556D6RIA3 1793 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 FAM47DPA6NHR8 397 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 PDHXO00330 501 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 TMCC1O94876 653 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ITGAVP06756 1048 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 KRT7P08729 469 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 PDGFRBP09619 1106 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 AKAP5P24588 427 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ATP5DP30049 168 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ZRSR2Q15696 482 aaKnown RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 CCDC142Q17RM4 750 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 GOLGA7BQ2TAP0 167 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 PPP6R3Q5H9R7 873 aaPredicted RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 PPP1R26Q5T8A7 1209 aaPredicted RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 PMF1Q6P1K2 205 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 CENPUQ71F23 418 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 FASTKD5Q7L8L6 764 aaKnown RBP14.39□□□□□ -0.11
SF1-202ENST00000334944 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 CLEC4CQ8WTT0 213 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 PYROXD1Q8WU10 500 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 ACAP3Q96P50 834 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 LHX5Q9H2C1 402 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 STARD13Q9Y3M8 1113 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 COMMD3-BMI1R4GMX3 469 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 CLUHO75153 1309 aa14.39□□□□□ -0.11
SF1-202ENST00000334944 TXNDC9O14530 226 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 C3orf62Q6ZUJ4 267 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 IGDCC3Q8IVU1 814 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 SMC1BQ8NDV3 1235 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 GRAMD1AQ96CP6 724 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 DPEP3Q9H4B8 488 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 PCDH9Q9HC56 1237 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 HEY2Q9UBP5 337 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 NME7Q9Y5B8 376 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 A0A0G2JMZ2 1700 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 ASB14A6NK59 587 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 TRUB2O95900 331 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 CA4P22748 312 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 SLC26A2P50443 739 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 TAP1Q03518 808 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 MORF4L2Q15014 288 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 DARS2Q6PI48 645 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 DPP9Q86TI2 863 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 TRABD2AQ86V40 505 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 NCSTNQ92542 709 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 OSMRQ99650 979 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 TRIM56Q9BRZ2 755 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 BTBD10Q9BSF8 475 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 XPO7Q9UIA9 1087 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SF1-202ENST00000334944 EDF1O60869 148 aaKnown RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 SNAI1O95863 264 aaPredicted RBP14.38□□□□□ -0.11
SF1-202ENST00000334944 MCF2P10911 925 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms