RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SELENOOQ9BVL4 669 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 TRMT61BQ9BVS5 477 aaKnown RBP27.08■■□□□ 1.93
SMDT1-201ENST00000331479 SORCS3Q9UPU3 1222 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 SIGLEC16A6NMB1 481 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 ZNF263O14978 683 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 STC2O76061 302 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 IGLV3-25P01717 112 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 TFE3P19532 575 aaPredicted RBP27.07■■□□□ 1.92
SMDT1-201ENST00000331479 GDI1P31150 447 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 GPC5P78333 572 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 PPP1R15BQ5SWA1 713 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 ARCQ7LC44 396 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 DDX42Q86XP3 938 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMDT1-201ENST00000331479 ZNF653Q96CK0 615 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 DDX23Q9BUQ8 820 aaKnown RBP27.07■■□□□ 1.92
SMDT1-201ENST00000331479 THAP2Q9H0W7 228 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 CALCOCO1Q9P1Z2 691 aa27.07■■□□□ 1.92
SMDT1-201ENST00000331479 CNOT8Q9UFF9 292 aaKnown RBP27.07■■□□□ 1.92
SMDT1-201ENST00000331479 SOWAHDA6NJG2 315 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 GOLGA6L6A8MZA4 724 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 TRUB2O95900 331 aaKnown RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 RFC1P35251 1148 aaPredicted RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 RPL7AP62424 266 aaKnown RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 MAMLD1Q13495 774 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 OTUD1Q5VV17 481 aaPredicted RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 PLEKHA7Q6IQ23 1121 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 TMEM139Q8IV31 216 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 YAF2Q8IY57 180 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 PACSIN1Q9BY11 444 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 SH3BP1Q9Y3L3 701 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 HBS1LQ9Y450 684 aaKnown RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 WNT6Q9Y6F9 365 aa27.06■■□□□ 1.92
SMDT1-201ENST00000331479 KIF26AQ9ULI4 1882 aaPredicted RBP27.06■■□□□ 1.92
SMDT1-201ENST00000331479 KLKB1P03952 638 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 GALCP54803 685 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 EIF4EBP2Q13542 120 aaPredicted RBP27.05■■□□□ 1.92
SMDT1-201ENST00000331479 TRIM68Q6AZZ1 485 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 TMTC1Q8IUR5 882 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 NT5C3BQ969T7 300 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 CFAP57Q96MR6 1250 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 NPY6RQ99463 290 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 BAG1Q99933 345 aaPredicted RBP27.05■■□□□ 1.92
SMDT1-201ENST00000331479 LINC00597Q9H2U6 94 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 PARVAQ9NVD7 372 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 MYO1AQ9UBC5 1043 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 E2F8A0AVK6 867 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 C2CD4BA6NLJ0 364 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 MYBL1P10243 752 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 TRIP4Q15650 581 aaPredicted RBP27.05■■□□□ 1.92
SMDT1-201ENST00000331479 CC2D1AQ6P1N0 951 aaPredicted RBP27.05■■□□□ 1.92
SMDT1-201ENST00000331479 RXFP2Q8WXD0 754 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 TRIM11Q96F44 468 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 SERPINB11Q96P15 392 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 MCEEQ96PE7 176 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 FAM83CQ9BQN1 747 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 THG1LQ9NWX6 298 aaKnown RBP27.05■■□□□ 1.92
SMDT1-201ENST00000331479 DUSP12Q9UNI6 340 aa27.05■■□□□ 1.92
SMDT1-201ENST00000331479 SYNJ2BP-COX16A0A087WUM0 186 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 ARNTLO00327 626 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 CHADO15335 359 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 IRAK2O43187 625 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 IGLV3-27P01718 113 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 TBX4P57082 545 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 GSDMDP57764 484 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 SLC25A52Q3SY17 297 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 ARHGAP29Q52LW3 1261 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 HTR3DQ70Z44 454 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 BBS7Q8IWZ6 715 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 CCDC170Q8IYT3 715 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 OSCP1Q8WVF1 389 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 PLD4Q96BZ4 506 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 ARHGEF26Q96DR7 871 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 TBCBQ99426 244 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 BRD9Q9H8M2 597 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 FAM204AQ9H8W3 233 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 DDIT4Q9NX09 232 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 DUS2Q9NX74 493 aaKnown RBP27.04■■□□□ 1.92
SMDT1-201ENST00000331479 COX16Q9P0S2 106 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 TLR6Q9Y2C9 796 aa27.04■■□□□ 1.92
SMDT1-201ENST00000331479 ANKRD62A6NC57 917 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 M0QYT0 321 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 SRFP11831 508 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 PDGFRAP16234 1089 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 CORO1AP31146 461 aaKnown RBP27.03■■□□□ 1.92
SMDT1-201ENST00000331479 SULT1E1P49888 294 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 TNK2Q07912 1038 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 RAD9BQ6WBX8 426 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 Q6ZNB5 142 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 SLC39A13Q96H72 371 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 FCRL2Q96LA5 508 aaPredicted RBP27.03■■□□□ 1.92
SMDT1-201ENST00000331479 STAP1Q9ULZ2 295 aa27.03■■□□□ 1.92
SMDT1-201ENST00000331479 KPNA1P52294 538 aaPredicted RBP27.02■■□□□ 1.92
SMDT1-201ENST00000331479 NME3Q13232 169 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 NNTQ13423 1086 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 CCDC14Q49A88 953 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 DCUN1D2Q6PH85 259 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 TRIM7Q9C029 511 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 EBF3Q9H4W6 596 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 HPS4Q9NQG7 708 aa27.02■■□□□ 1.92
SMDT1-201ENST00000331479 RRN3Q9NYV6 651 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms