RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SPG21Q9NZD8 308 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 HEY2Q9UBP5 337 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 SMG5Q9UPR3 1016 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 USP17L7P0C7H9 530 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CYP2F1P24903 491 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 DEFA1P59665 94 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 DEFA3P59666 94 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 DNAL1Q4LDG9 190 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 NARS2Q96I59 477 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 UBXN6Q9BZV1 441 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 TBC1D23Q9NUY8 699 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 ZCCHC11Q5TAX3 1644 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 PDHXO00330 501 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 AMD1P17707 334 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 GCLCP48506 637 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 SEC24CP53992 1094 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 GEMP55040 296 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 TERF2Q15554 542 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 SETMARQ53H47 684 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 MARK4Q96L34 752 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 KCNK16Q96T55 309 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 NCKAP1Q9Y2A7 1128 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CDC42BPBQ9Y5S2 1711 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 COILP38432 576 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ST13P50502 369 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 WLSQ5T9L3 541 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 TBCDQ9BTW9 1192 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CARD9Q9H257 536 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 ELOVL6Q9H5J4 265 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 COPAP53621 1224 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PPP1R26Q5T8A7 1209 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 KLHL17Q6TDP4 642 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PARP8Q8N3A8 854 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 NAT16Q8N8M0 369 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 NSL1Q96IY1 281 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 MKNK1Q9BUB5 465 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 DLGAP2Q9P1A6 1054 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 AAR2Q9Y312 384 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ZBTB22O15209 634 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 HNRNPRO43390 633 aaKnown RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 FDX1P10109 184 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 FMO4P31512 558 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 KCTD19Q17RG1 926 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 SLC13A5Q86YT5 568 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 C2orf73Q8N5S3 287 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 COLGALT1Q8NBJ5 622 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 IGDCC4Q8TDY8 1250 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 EMID1Q96A84 441 aaPredicted RBP10.85□□□□□ -0.67
CLN8-201ENST00000331222 ZIM3Q96PE6 472 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 SIKE1Q9BRV8 207 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 TIPINQ9BVW5 301 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 BPIFA1Q9NP55 256 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 UVRAGQ9P2Y5 699 aa10.85□□□□□ -0.67
CLN8-201ENST00000331222 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 NAB2Q15742 525 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 SLC39A12Q504Y0 691 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 AGKQ53H12 422 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CCDC92Q53HC0 331 aaPredicted RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CACTIN-AS1Q8N1I8 211 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CCDC185Q8N715 623 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 BPIFA3Q9BQP9 254 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 GPAMQ9HCL2 828 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CDH8P55286 799 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CYP24A1Q07973 514 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 TFDP3Q5H9I0 405 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 ZNF57Q68EA5 555 aaPredicted RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 POMZP3Q6PJE2 187 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RPRD1BQ9NQG5 326 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 CLTCQ00610 1675 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 FAM20BO75063 409 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RIPOR1Q6ZS17 1223 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RASGRP2Q7LDG7 609 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 MRPS26Q9BYN8 205 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 OR6B1O95007 311 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 CNPP09543 421 aaKnown RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 CYLC2Q14093 348 aaPredicted RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 ZNF697Q5TEC3 545 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 FNDC5Q8NAU1 212 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 ZSCAN18Q8TBC5 510 aaPredicted RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 CGRRF1Q99675 332 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 SERHL2Q9H4I8 314 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 SERHLQ9NQF3 203 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 ZNF624Q9P2J8 865 aaPredicted RBP10.84□□□□□ -0.67
CLN8-201ENST00000331222 DUSP10Q9Y6W6 482 aa10.84□□□□□ -0.67
CLN8-201ENST00000331222 ZNF609O15014 1411 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms