RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TAF10Q12962 218 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 ZNF268Q14587 947 aaPredicted RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SPOCD1Q6ZMY3 1216 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 CACNA2D3Q8IZS8 1091 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 KHSRPQ92945 711 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SMOQ99835 787 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 VANGL2Q9ULK5 521 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 A0A0A6YYK5 440 aaPredicted RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 CLGNO14967 610 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 APRTP07741 180 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SAT1P21673 171 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SLC1A1P43005 524 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 IFNAR2P48551 515 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 BYSLQ13895 437 aaKnown RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 P3H1Q32P28 736 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 ARL13BQ3SXY8 428 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 FAM133BQ5BKY9 247 aaKnown RBP16.48■□□□□ 0.23
PDGFB-201ENST00000331163 DENND5BQ6ZUT9 1274 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 CCDC185Q8N715 623 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 DERAQ9Y315 318 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 PCDHA3Q9Y5H8 950 aa16.48■□□□□ 0.23
PDGFB-201ENST00000331163 ADAM12O43184 909 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 FSBPO95073 299 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 TRUB2O95900 331 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 GALTP07902 379 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 INTS6LQ5JSJ4 861 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 PLEKHA7Q6IQ23 1121 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 MGARPQ8TDB4 240 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 HES6Q96HZ4 224 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 FMO2Q99518 471 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 A0A1W2PQH9 124 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 EOMESO95936 686 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 MAGOHP61326 146 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 SKOR1P84550 965 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 LRRC43Q8N309 656 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 FIBCD1Q8N539 461 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 FBXO25Q8TCJ0 367 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 GMNCA6NCL1 334 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 VEPH1Q14D04 833 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 KDM7AQ6ZMT4 941 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 SLFN11Q7Z7L1 901 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 CFAP52Q8N1V2 620 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 TMEM86AQ8N2M4 240 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 PAK6Q9NQU5 681 aaPredicted RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 GMIPQ9P107 970 aa16.47■□□□□ 0.23
PDGFB-201ENST00000331163 KLHL8Q9P2G9 620 aaPredicted RBP16.47■□□□□ 0.23
PDGFB-201ENST00000331163 DDX3YO15523 660 aaKnown RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 HOXA2O43364 376 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 CXCL14O95715 111 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 FAM107AO95990 144 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 ACADSBP45954 432 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 MGAT3Q09327 533 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 PID1Q7Z2X4 250 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 TBC1D1Q86TI0 1168 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 FAF2Q96CS3 445 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 RAB6BQ9NRW1 208 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 TPX2Q9ULW0 747 aaKnown RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 YWHAGP61981 247 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 TFDP3Q5H9I0 405 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 CHSY1Q86X52 802 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 CIR1Q86X95 450 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 RCOR2Q8IZ40 523 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 PRELID2Q8N945 189 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 DNAAF3Q8N9W5 541 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 CCDC110Q8TBZ0 833 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 RPRD1AQ96P16 312 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-201ENST00000331163 FERMT1Q9BQL6 677 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
PDGFB-201ENST00000331163 PMM2O15305 246 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 COILP38432 576 aaPredicted RBP16.46■□□□□ 0.22
PDGFB-201ENST00000331163 MRPS5P82675 430 aaKnown RBP16.46■□□□□ 0.22
PDGFB-201ENST00000331163 TCTN1Q2MV58 587 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 USP41Q3LFD5 358 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 CCDC14Q49A88 953 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 CCDC38Q502W7 563 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 NAIF1Q69YI7 327 aaPredicted RBP16.46■□□□□ 0.22
PDGFB-201ENST00000331163 RNF19BQ6ZMZ0 732 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 ARFGAP2Q8N6H7 521 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 ARNTL2Q8WYA1 636 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 HERPUD2Q9BSE4 406 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 AVENQ9NQS1 362 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms