RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CLTBP09497 229 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 GPR1P46091 355 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PTSQ03393 145 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 WASHC2DQ5SRD0 308 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MED8Q96G25 268 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SPATA33Q96N06 139 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DPYDQ12882 1025 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SEC24AO95486 1093 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ENO2P09104 434 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 AMHR2Q16671 573 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 RFT1Q96AA3 541 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 EXTL3O43909 919 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 RCVRNP35243 200 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 NRG3P56975 720 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MAPK7Q13164 816 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DNAJC11Q9NVH1 559 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ATPIF1Q9UII2 106 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 HPGDP15428 266 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TGFBR2P37173 567 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CHN2P52757 468 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DSG4Q86SJ6 1040 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SYNPOQ8N3V7 929 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ACOX2Q99424 681 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 STARD7Q9NQZ5 370 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SH3BP4Q9P0V3 963 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CIDEBQ9UHD4 219 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 O00370 1275 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PDK1Q15118 436 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MTFR1Q15390 333 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 VPS33AQ96AX1 596 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MED15Q96RN5 788 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TBCDQ9BTW9 1192 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■□□□□ 10
RAB11FIP1-202ENST00000330843 SLC25A13Q9UJS0 675 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 RAPGEF6Q8TEU7 1601 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 APOL3O95236 402 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PHKG2P15735 406 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CENPCQ03188 943 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 FASTKQ14296 549 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 EFL1Q7Z2Z2 1120 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DENND6BQ8NEG7 585 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 FNIP1Q8TF40 1166 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
RAB11FIP1-202ENST00000330843 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 NCAM1P13591 858 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 SLC2A4P14672 509 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 VAV1P15498 845 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 CCDC185Q8N715 623 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 DCAF4Q8WV16 495 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ANKS1AQ92625 1134 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 KRT35Q92764 455 aa13.08□□□□□ -0.31
RAB11FIP1-202ENST00000330843 ZBTB11O95625 1053 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 GPD1P21695 349 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 USP11P51784 963 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 CCNHP51946 323 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 ORC1Q13415 861 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 PAFAH2Q99487 392 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 CRLS1Q9UJA2 301 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 LYVE1Q9Y5Y7 322 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 CCNKO75909 580 aa13.08□□□□□ -0.32
RAB11FIP1-202ENST00000330843 EPN2O95208 641 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms