RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PLEKHO2Q8TD55 490 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 CSGALNACT1Q8TDX6 532 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 NOC3LQ8WTT2 800 aaKnown RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 MYLPFQ96A32 169 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PCED1BQ96HM7 432 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 MMS19Q96T76 1030 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PI4K2AQ9BTU6 479 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 SLC46A2Q9BY10 475 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PRDM16Q9HAZ2 1276 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 TMEM8AQ9HCN3 771 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PNPLA8Q9NP80 782 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 HEBP1Q9NRV9 189 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 TDP1Q9NUW8 608 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 IL37Q9NZH6 218 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PCDHGA2Q9Y5H1 932 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 FAM170BA6NMN3 283 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 TADA3O75528 432 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 SOAT2O75908 522 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 EPB41P11171 864 aaKnown RBP6.72□□□□□ -1.33
SMG1-201ENST00000330588 ACAT1P24752 427 aaKnown RBP6.72□□□□□ -1.33
SMG1-201ENST00000330588 LMO2P25791 158 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 SLC7A9P82251 487 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 FZD5Q13467 585 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 BIRC3Q13489 604 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 GRM2Q14416 872 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 ITPRIPL2Q3MIP1 535 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 C1orf220Q5T0J3 134 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 DENND5BQ6ZUT9 1274 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 FAM186BQ8IYM0 893 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 ZNF276Q8N554 614 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 CCDC150Q8NCX0 1101 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 OR6B3Q8NGW1 331 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 CCDC26Q8TAB7 109 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 FAM3CQ92520 227 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 SMARCD1Q96GM5 515 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 NSUN5Q96P11 429 aaKnown RBP6.72□□□□□ -1.33
SMG1-201ENST00000330588 TSG101Q99816 390 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 FAM83CQ9BQN1 747 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 MRPL45Q9BRJ2 306 aaKnown RBP6.72□□□□□ -1.33
SMG1-201ENST00000330588 CSNK1G1Q9HCP0 422 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 GCNT4Q9P109 453 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 ARHGAP26Q9UNA1 814 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 COQ4Q9Y3A0 265 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 PIAS3Q9Y6X2 628 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 MUC3AQ02505 3323 aa6.72□□□□□ -1.33
SMG1-201ENST00000330588 VCANP13611 3396 aa6.71□□□□□ -1.33
SMG1-201ENST00000330588 PRR23AA6NEV1 266 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 A8MXQ7 604 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 SPECC1L-ADORA2AF8WAN1 911 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 H0Y858 1186 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 TRDMT1O14717 391 aaKnown RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 CETN3O15182 167 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 LAMTOR5O43504 91 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 AKAP3O75969 853 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 PRAMEF12O95522 483 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 GHRHP01286 108 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 HLA-DRAP01903 254 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 DCNP07585 359 aaKnown RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 SP9P0CG40 484 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 GJA1P17302 382 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 BDNFP23560 247 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 GRIK1P39086 918 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 VIPR2P41587 438 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 PIK3CAP42336 1068 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 ASPAP45381 313 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 CASP4P49662 377 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 CCR3P51677 355 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 CYP4F8P98187 520 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 FKBP3Q00688 224 aaKnown RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 ADAM9Q13443 819 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 STIM1Q13586 685 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 UBXN2BQ14CS0 331 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 ZNF77Q15935 545 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 DDR2Q16832 855 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 FBXO43Q4G163 708 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 MDH1BQ5I0G3 518 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 STXBP5Q5T5C0 1151 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 CEP135Q66GS9 1140 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 KRT39Q6A163 491 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 SCARA3Q6AZY7 606 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 SPEM1Q8N4L4 309 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 ZBTB44Q8NCP5 570 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 USP13Q92995 863 aaPredicted RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 ATP2A3Q93084 1043 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 NKD2Q969F2 451 aaPredicted RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 SMARCE1Q969G3 411 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 OTUB2Q96DC9 234 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 RSPRY1Q96DX4 576 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 DHTKD1Q96HY7 919 aaPredicted RBP6.71□□□□□ -1.34
SMG1-201ENST00000330588 DMRTB1Q96MA1 342 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 SLITRK1Q96PX8 696 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 B3GNT5Q9BYG0 378 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 FOXQ1Q9C009 403 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
SMG1-201ENST00000330588 FBXO44Q9H4M3 255 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms