RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 QKIQ96PU8 341 aaKnown RBP eCLIP15.1■□□□□ 0.018e-8■■■■■ 32.5
TPM3-206ENST00000330188 VPS11Q9H270 941 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 TRIM33Q9UPN9 1127 aa15.1■□□□□ 0.01
TPM3-206ENST00000330188 XPO1O14980 1071 aaKnown RBP15.09■□□□□ 0.01
TPM3-206ENST00000330188 FAM155BO75949 473 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 UNC5CO95185 931 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 DHRS4L1P0CG22 281 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 ZNF865P0CJ78 1059 aaPredicted RBP15.09■□□□□ 0.01
TPM3-206ENST00000330188 PRKCHP24723 683 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 ETV4P43268 484 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 NR2C2P49116 596 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 RIPK1Q13546 671 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 SETDB1Q15047 1291 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 KCNT2Q6UVM3 1135 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 VPS52Q8N1B4 723 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 KIF2BQ8N4N8 673 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 CCDC33Q8N5R6 958 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 ARRDC4Q8NCT1 418 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 LRRC39Q96DD0 335 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 ERP27Q96DN0 273 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 TSPAN18Q96SJ8 248 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 DTLQ9NZJ0 730 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 MFHAS1Q9Y4C4 1052 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 IPPQ9Y573 584 aa15.09■□□□□ 0.01
TPM3-206ENST00000330188 VGLL3A8MV65 326 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 CXorf49A8MYA2 514 aaPredicted RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 DCTN3O75935 186 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 TOMM70O94826 608 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 KRT16P08779 473 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 PYGBP11216 843 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 TPSB2P20231 275 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 AMPD1P23109 780 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 WARSP23381 471 aaKnown RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 MATKP42679 507 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 FKBP1BP68106 108 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 MAP2K5Q13163 448 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 IRF5Q13568 498 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 TPSAB1Q15661 275 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 TTC39BQ5VTQ0 682 aaPredicted RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 PYROXD2Q8N2H3 581 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 PPM1NQ8N819 430 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 B3GALNT2Q8NCR0 500 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 SMG8Q8ND04 991 aaKnown RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 NDRG1Q92597 394 aaKnown RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 TNIP3Q96KP6 325 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 NOD2Q9HC29 1040 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 SMYD2Q9NRG4 433 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 FZD10Q9ULW2 581 aa15.08■□□□□ 0.01
TPM3-206ENST00000330188 ZNF638Q14966 1978 aaKnown RBP15.08■□□□□ 0.01
TPM3-206ENST00000330188 TRDMT1O14717 391 aaKnown RBP15.08■□□□□ 0
TPM3-206ENST00000330188 HUS1O60921 280 aa15.08■□□□□ 0
TPM3-206ENST00000330188 GOT1P17174 413 aa15.08■□□□□ 0
TPM3-206ENST00000330188 LILRA4P59901 499 aa15.08■□□□□ 0
TPM3-206ENST00000330188 EFHC1Q5JVL4 640 aa15.08■□□□□ 0
TPM3-206ENST00000330188 PIGZQ86VD9 579 aa15.08■□□□□ 0
TPM3-206ENST00000330188 LRRC6Q86X45 466 aa15.08■□□□□ 0
TPM3-206ENST00000330188 CHSY1Q86X52 802 aa15.08■□□□□ 0
TPM3-206ENST00000330188 DEFB106AQ8N104 65 aa15.08■□□□□ 0
TPM3-206ENST00000330188 PTPRN2Q92932 1015 aa15.08■□□□□ 0
TPM3-206ENST00000330188 SIGLEC10Q96LC7 697 aa15.08■□□□□ 0
TPM3-206ENST00000330188 LRRC37BQ96QE4 947 aa15.08■□□□□ 0
TPM3-206ENST00000330188 HNRNPABQ99729 332 aaKnown RBP15.08■□□□□ 0
TPM3-206ENST00000330188 MANSC1Q9H8J5 431 aa15.08■□□□□ 0
TPM3-206ENST00000330188 TXLNGQ9NUQ3 528 aa15.08■□□□□ 0
TPM3-206ENST00000330188 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
TPM3-206ENST00000330188 CPA4Q9UI42 421 aa15.08■□□□□ 0
TPM3-206ENST00000330188 ZNF180Q9UJW8 692 aa15.08■□□□□ 0
TPM3-206ENST00000330188 DGKIO75912 1065 aa15.07■□□□□ 0
TPM3-206ENST00000330188 GSTA2P09210 222 aa15.07■□□□□ 0
TPM3-206ENST00000330188 VAV1P15498 845 aa15.07■□□□□ 0
TPM3-206ENST00000330188 SULT1E1P49888 294 aa15.07■□□□□ 0
TPM3-206ENST00000330188 GTF2A1P52655 376 aaPredicted RBP15.07■□□□□ 0
TPM3-206ENST00000330188 CRYBB1P53674 252 aaPredicted RBP15.07■□□□□ 0
TPM3-206ENST00000330188 ADIGQ0VDE8 80 aa15.07■□□□□ 0
TPM3-206ENST00000330188 SLC25A52Q3SY17 297 aa15.07■□□□□ 0
TPM3-206ENST00000330188 OTUD1Q5VV17 481 aaPredicted RBP15.07■□□□□ 0
TPM3-206ENST00000330188 FYB2Q5VWT5 728 aa15.07■□□□□ 0
TPM3-206ENST00000330188 UNC5AQ6ZN44 842 aa15.07■□□□□ 0
TPM3-206ENST00000330188 FAM131BQ86XD5 332 aa15.07■□□□□ 0
TPM3-206ENST00000330188 CTAGE3PQ8IX95 158 aa15.07■□□□□ 0
TPM3-206ENST00000330188 OLFM3Q96PB7 478 aa15.07■□□□□ 0
TPM3-206ENST00000330188 FAM111AQ96PZ2 611 aa15.07■□□□□ 0
TPM3-206ENST00000330188 DNAI2Q9GZS0 605 aa15.07■□□□□ 0
TPM3-206ENST00000330188 ALG13Q9NP73 1137 aaKnown RBP15.07■□□□□ 0
TPM3-206ENST00000330188 NPHS2Q9NP85 383 aa15.07■□□□□ 0
TPM3-206ENST00000330188 TRIM49D1C9J1S8 452 aa15.07■□□□□ 0
TPM3-206ENST00000330188 CLDN5O00501 218 aa15.07■□□□□ 0
TPM3-206ENST00000330188 DAB1O75553 588 aa15.07■□□□□ 0
TPM3-206ENST00000330188 APOEP02649 317 aa15.07■□□□□ 0
TPM3-206ENST00000330188 MYL3P08590 195 aa15.07■□□□□ 0
TPM3-206ENST00000330188 SNRPAP09012 282 aaKnown RBP15.07■□□□□ 0
TPM3-206ENST00000330188 ALDH3A1P30838 453 aa15.07■□□□□ 0
TPM3-206ENST00000330188 BEX3Q00994 111 aa15.07■□□□□ 0
TPM3-206ENST00000330188 SEMA5AQ13591 1074 aa15.07■□□□□ 0
TPM3-206ENST00000330188 PLEKHG4Q58EX7 1191 aa15.07■□□□□ 0
TPM3-206ENST00000330188 HEATR6Q6AI08 1181 aaKnown RBP15.07■□□□□ 0
TPM3-206ENST00000330188 MPP5Q8N3R9 675 aa15.07■□□□□ 0
TPM3-206ENST00000330188 TOP6BLQ8N6T0 577 aa15.07■□□□□ 0
TPM3-206ENST00000330188 ZNF398Q8TD17 642 aa15.07■□□□□ 0
TPM3-206ENST00000330188 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms