RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ZNF330Q9Y3S2 320 aaPredicted RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 ZNFX1Q9P2E3 1918 aaKnown RBP8.65□□□□□ -1.02
SKA2-201ENST00000330137 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
SKA2-201ENST00000330137 RGS13O14921 159 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 PRKCHP24723 683 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 HOXA10P31260 410 aaPredicted RBP8.65□□□□□ -1.02
SKA2-201ENST00000330137 GABRB2P47870 512 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 PSMD8P48556 350 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 CYP2J2P51589 502 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 HERC3Q15034 1050 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 ABCB5Q2M3G0 1257 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 Q3C1V9 767 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 TFDP3Q5H9I0 405 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 AGAP7PQ5VUJ5 663 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 SUSD4Q5VX71 490 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 PDPK2PQ6A1A2 396 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 KRT80Q6KB66 452 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 NSMFQ6X4W1 530 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 MON1BQ7L1V2 547 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 RPGRQ92834 1020 aaKnown RBP8.65□□□□□ -1.02
SKA2-201ENST00000330137 UHRF1Q96T88 793 aaPredicted RBP8.65□□□□□ -1.02
SKA2-201ENST00000330137 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 ST6GALNAC4Q9H4F1 302 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 RIC8BQ9NVN3 520 aa8.65□□□□□ -1.02
SKA2-201ENST00000330137 TCRBV9S1A1TA0A576 114 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 USP17L5A8MUK1 530 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 MEI4A8MW99 385 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 RSL1D1O76021 490 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 NAT1P18440 290 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 TKTP29401 623 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 HIBADHP31937 336 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 GNL1P36915 607 aaPredicted RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 TMBIM6P55061 237 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 MRPS5P82675 430 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 TAP1Q03518 808 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 C1QBPQ07021 282 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 PPP3CAQ08209 521 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 PPIL2Q13356 520 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 FLOT2Q14254 428 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 PIGGQ5H8A4 983 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 MDH1BQ5I0G3 518 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 FNBP1LQ5T0N5 605 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 C6orf52Q5T4I8 152 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 TTC30AQ86WT1 665 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 PHF13Q86YI8 300 aaPredicted RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 MCF2L2Q86YR7 1114 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 RP9Q8TA86 221 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 HELQQ8TDG4 1101 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 NT5C1BQ96P26 610 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 RMDN3Q96TC7 470 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 RPF2Q9H7B2 306 aaKnown RBP8.65□□□□□ -1.03
SKA2-201ENST00000330137 TEX264Q9Y6I9 313 aa8.65□□□□□ -1.03
SKA2-201ENST00000330137 LY75O60449 1722 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 hCG_1818297A0A087WSY0 165 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A9O60656 530 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 NTRK1P04629 796 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 CYP3A4P08684 503 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A6P19224 532 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A1P22309 533 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A4P22310 534 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A3P35503 534 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A5P35504 534 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 NSFP46459 744 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 CDKL1Q00532 357 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ZNF543Q08ER8 600 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 GALNT2Q10471 571 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 AOC3Q16853 763 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ITPRIPL1Q6GPH6 555 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 C16orf46Q6P387 395 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SPOCD1Q6ZMY3 1216 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 POLNQ7Z5Q5 900 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ITIH5Q86UX2 942 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 PGAM4Q8N0Y7 254 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 TTC30BQ8N4P2 665 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UBR7Q8N806 425 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 XXYLT1Q8NBI6 393 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 PDCD6IPQ8WUM4 868 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SENP7Q9BQF6 1050 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 EIF2AK1Q9BQI3 630 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A7Q9HAW7 530 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A10Q9HAW8 530 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 UGT1A8Q9HAW9 530 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 TMEM8AQ9HCN3 771 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ACP6Q9NPH0 428 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
SKA2-201ENST00000330137 VAV3Q9UKW4 847 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 ZNF839A8K0R7 811 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 TRIM49D1C9J1S8 452 aa8.64□□□□□ -1.03
SKA2-201ENST00000330137 SGK1O00141 431 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms