RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 TMTC4Q5T4D3 741 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 SCUBE1Q8IWY4 988 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 NETO2Q8NC67 525 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 ULK4Q96C45 1275 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 CCDC138Q96M89 665 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 ZNF512Q96ME7 567 aaPredicted RBP14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 MRPL40Q9NQ50 206 aaKnown RBP14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 ETNK2Q9NVF9 386 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 AURKCQ9UQB9 309 aa14.2□□□□□ -0.14
DNMT3B-202ENST00000328111 SERPINB5P36952 375 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ABCG1P45844 678 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 FASTKD3Q14CZ7 662 aaKnown RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 FAM136AQ96C01 138 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 EGFL8Q99944 293 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 NSMCE4AQ9NXX6 385 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 CDYLQ9Y232 598 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 POMCP01189 267 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ABHD2P08910 425 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PDE1CQ14123 709 aaPredicted RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 POU6F1Q14863 301 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 MAPRE2Q15555 327 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ZDHHC17Q8IUH5 632 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 POU5F2Q8N7G0 328 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PLEKHO2Q8TD55 490 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ARHGAP26Q9UNA1 814 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ZMYM2Q9UBW7 1377 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 LRCH4O75427 683 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 SERPINB8P50452 374 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 HADHBP55084 474 aaKnown RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 C10orf120Q5SQS8 335 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 NT5DC4Q86YG4 428 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 CALML6Q8TD86 181 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 USP6NLQ92738 828 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 TSPAN17Q96FV3 270 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 RPRD1AQ96P16 312 aaPredicted RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PDGFDQ9GZP0 370 aaPredicted RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 NDFIP2Q9NV92 336 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 RUVBL2Q9Y230 463 aaKnown RBP14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 RPTORQ8N122 1335 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 GP5P40197 560 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 PDK4Q16654 411 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 GALNT4Q8N4A0 578 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 ACSS3Q9H6R3 686 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 HACD3Q9P035 362 aa14.19□□□□□ -0.14
DNMT3B-202ENST00000328111 CNTFP26441 200 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ARL2P36404 184 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 CYTH1Q15438 398 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ZBTB18Q99592 522 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 GPR20Q99678 358 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 GBA2Q9HCG7 927 aaPredicted RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ADGRA3Q8IWK6 1321 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 NDUFS3O75489 264 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 GRK2P25098 689 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 NR2C2P49116 596 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 FAM83EQ2M2I3 478 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 MFSD5Q6N075 450 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ZDHHC24Q6UX98 284 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 TFAP2BQ92481 460 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 NAF1Q96HR8 494 aaKnown RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 DRC3Q9H069 523 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ATXN3LQ9H3M9 355 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 STARD13Q9Y3M8 1113 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 SLC4A7Q9Y6M7 1214 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 FBXO21O94952 628 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 LHX1P48742 406 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 FOXD4Q12950 439 aaPredicted RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 SLC45A4Q5BKX6 768 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 PRAMEF19Q5SWL8 479 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 PPP1R26Q5T8A7 1209 aaPredicted RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 TLK2Q86UE8 772 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 AGAP11Q8TF27 550 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ZNF516Q92618 1163 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 OXNAD1Q96HP4 312 aaPredicted RBP14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 GAD1Q99259 594 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 ULBP1Q9BZM6 244 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 TRIM15Q9C019 465 aa14.18□□□□□ -0.14
DNMT3B-202ENST00000328111 SUPT7LO94864 414 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 UNC5CO95185 931 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 ERBB2P04626 1255 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 UNGP13051 313 aaPredicted RBP14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 MTMR14Q8NCE2 650 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 STKLD1Q8NE28 680 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 BLOC1S5Q8TDH9 187 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 EME1Q96AY2 570 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 NRDE2Q9H7Z3 1164 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 IL1RL2Q9HB29 575 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 ZFYVE28Q9HCC9 887 aa14.17□□□□□ -0.14
DNMT3B-202ENST00000328111 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.147e-6■■■□□ 17.4
DNMT3B-202ENST00000328111 TMEM59LQ9UK28 342 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms