RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TFDP3Q5H9I0 405 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 FAM43BQ6ZT52 329 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-201ENST00000327367 PTAR1Q7Z6K3 402 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-201ENST00000327367 EXOC3L1Q86VI1 746 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 YME1L1Q96TA2 773 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 SLC9A8Q9Y2E8 581 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 SHBGP04278 402 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 ME2P23368 584 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 CLK2P49760 499 aaKnown RBP16.89■□□□□ 0.29
SMAD3-201ENST00000327367 RBP5P82980 135 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 AKAP14Q86UN6 197 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 HIPK1Q86Z02 1210 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 IGDCC4Q8TDY8 1250 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 OSCP1Q8WVF1 389 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 ITGB6P18564 788 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-201ENST00000327367 SLC25A24Q6NUK1 477 aa16.89■□□□□ 0.29
SMAD3-201ENST00000327367 SEPT5Q99719 369 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-201ENST00000327367 ENDOD1O94919 500 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 DARSP14868 501 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 RAP1GAPP47736 663 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 SLC5A9Q2M3M2 681 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ENGASEQ8NFI3 743 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FBXO30Q8TB52 745 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 GPAMQ9HCL2 828 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 RSL24D1Q9UHA3 163 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 NDUFAF1Q9Y375 327 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 WDR27A2RRH5 827 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 TPH1P17752 444 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ERVK-9P63128 1117 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ZNF571Q7Z3V5 609 aaPredicted RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 COPS4Q9BT78 406 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 CATSPERBQ9H7T0 1116 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 TRPC4Q9UBN4 977 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 TP73O15350 636 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 CYP7B1O75881 506 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ANPEPP15144 967 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 SFSWAPQ12872 951 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 HIST2H2ACQ16777 129 aaPredicted RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 LDLRAP1Q5SW96 308 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 HIST2H2AA3Q6FI13 130 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 C16orf46Q6P387 395 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FAR1Q8WVX9 515 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 MTFMTQ96DP5 389 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 NDNQ99608 321 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 C9orf16Q9BUW7 83 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 JPH1Q9HDC5 661 aaPredicted RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 NINJ2Q9NZG7 142 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 QPRTQ15274 297 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 SUPT20HL1Q3ZLR7 823 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 TTC39CQ8N584 583 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 AENQ8WTP8 325 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 POP1Q99575 1024 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FICDQ9BVA6 458 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 USP21Q9UK80 565 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 A0A0U1RQJ8 604 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FAM237BA0A1B0GVD1 139 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 NFICP08651 508 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 STARP49675 285 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ADAM17P78536 824 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 FCHO2Q0JRZ9 810 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 RNASE12Q5GAN4 147 aaKnown RBP16.88■□□□□ 0.29
SMAD3-201ENST00000327367 CDC73Q6P1J9 531 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ZNF671Q8TAW3 534 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 ATXN10Q9UBB4 475 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 EFR3BQ9Y2G0 817 aa16.88■□□□□ 0.29
SMAD3-201ENST00000327367 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 RRN3P2A6NIE6 340 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 M0QYT0 321 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 C16orf62Q7Z3J2 963 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 COMMD2Q86X83 199 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 CYP4Z2PQ8N1L4 340 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 NT5C1AQ9BXI3 368 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 GMEB1Q9Y692 573 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 FAM220BPB1ANY3 271 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 TSPAN4O14817 238 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 SH3BGRLO75368 114 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 ADRA1DP25100 572 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 UBAP2LQ14157 1087 aaKnown RBP16.87■□□□□ 0.29
SMAD3-201ENST00000327367 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 MZT2BQ6NZ67 158 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 KRT74Q7RTS7 529 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 GATAD2AQ86YP4 633 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 C8orf59Q8N0T1 100 aaPredicted RBP16.87■□□□□ 0.29
SMAD3-201ENST00000327367 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMAD3-201ENST00000327367 TMEM138Q9NPI0 162 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
SMAD3-201ENST00000327367 CCR3P51677 355 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 IKBIPQ70UQ0 350 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 ITFG1Q8TB96 612 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
SMAD3-201ENST00000327367 PDCD10Q9BUL8 212 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 IL25Q9H293 177 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 ELOVL6Q9H5J4 265 aa16.87■□□□□ 0.29
SMAD3-201ENST00000327367 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms