RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 GPATCH2LQ9NWQ4 482 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 PPARGC1AQ9UBK2 798 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 GTF2IRD1Q9UHL9 959 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CITO14578 2027 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 EIF4E1BA6NMX2 242 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 H3BRJ5 948 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 PIK3R2O00459 728 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 HBP1O60381 514 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 GRAP2O75791 330 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 TM7SF2O76062 418 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 TOMM70O94826 608 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 METTL18O95568 372 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 GSRP00390 522 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 PDHA1P08559 390 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 SETSIPP0DME0 302 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 AMPD1P23109 780 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 CNTFP26441 200 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 PHKA2P46019 1235 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 WASHC5Q12768 1159 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 SEMA5AQ13591 1074 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 THOC5Q13769 683 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 TRMT5Q32P41 509 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 STEAP4Q687X5 459 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 TMEM110Q86TL2 294 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 CRLF3Q8IUI8 442 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 CDKL3Q8IVW4 592 aaPredicted RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 ADGRF2Q8IZF7 708 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 STKLD1Q8NE28 680 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 FAM172AQ8WUF8 416 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 ZBTB10Q96DT7 871 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 IFT43Q96FT9 208 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 C20orf27Q9GZN8 174 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 C1orf21Q9H246 121 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 NRDE2Q9H7Z3 1164 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 KRT82Q9NSB4 513 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 MOCS1Q9NZB8 636 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 TAGLN3Q9UI15 199 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 ITGA11Q9UKX5 1188 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 C2CD2Q9Y426 696 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 ASB3Q9Y575 518 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 PPP2R3BQ9Y5P8 575 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.01□□□□□ -0.97
CLK1-201ENST00000321356 MCM3APO60318 1980 aa9.01□□□□□ -0.97
CLK1-201ENST00000321356 LTBP3Q9NS15 1303 aa9□□□□□ -0.97
CLK1-201ENST00000321356 TRIP11Q15643 1979 aa9□□□□□ -0.97
CLK1-201ENST00000321356 CCDC195A0A1B0GUA6 201 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SDR42E2A6NKP2 422 aa9□□□□□ -0.97
CLK1-201ENST00000321356 GABBR2O75899 941 aa9□□□□□ -0.97
CLK1-201ENST00000321356 ALDH1A2O94788 518 aa9□□□□□ -0.97
CLK1-201ENST00000321356 ENO1P06733 434 aaKnown RBP9□□□□□ -0.97
CLK1-201ENST00000321356 SERPINA6P08185 405 aa9□□□□□ -0.97
CLK1-201ENST00000321356 AOC1P19801 751 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SP100P23497 879 aaPredicted RBP9□□□□□ -0.97
CLK1-201ENST00000321356 SDC4P31431 198 aa9□□□□□ -0.97
CLK1-201ENST00000321356 AQP5P55064 265 aa9□□□□□ -0.97
CLK1-201ENST00000321356 HDAC4P56524 1084 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SLC6A3Q01959 620 aa9□□□□□ -0.97
CLK1-201ENST00000321356 TMEM132DQ14C87 1099 aa9□□□□□ -0.97
CLK1-201ENST00000321356 DPYSL2Q16555 572 aa9□□□□□ -0.97
CLK1-201ENST00000321356 KYAT1Q16773 422 aa9□□□□□ -0.97
CLK1-201ENST00000321356 GOLGA7BQ2TAP0 167 aa9□□□□□ -0.97
CLK1-201ENST00000321356 OR52E8Q6IFG1 317 aa9□□□□□ -0.97
CLK1-201ENST00000321356 PMF1Q6P1K2 205 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SCYL2Q6P3W7 929 aa9□□□□□ -0.97
CLK1-201ENST00000321356 TMEM154Q6P9G4 183 aa9□□□□□ -0.97
CLK1-201ENST00000321356 KYAT3Q6YP21 454 aaKnown RBP9□□□□□ -0.97
CLK1-201ENST00000321356 TTC30AQ86WT1 665 aa9□□□□□ -0.97
CLK1-201ENST00000321356 NCAPG2Q86XI2 1143 aa9□□□□□ -0.97
CLK1-201ENST00000321356 MYLK4Q86YV6 388 aaPredicted RBP9□□□□□ -0.97
CLK1-201ENST00000321356 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
CLK1-201ENST00000321356 KBTBD2Q8IY47 623 aa9□□□□□ -0.97
CLK1-201ENST00000321356 NDUFAF2Q8N183 169 aa9□□□□□ -0.97
CLK1-201ENST00000321356 MPP5Q8N3R9 675 aa9□□□□□ -0.97
CLK1-201ENST00000321356 LINC01465Q8N7H1 131 aa9□□□□□ -0.97
CLK1-201ENST00000321356 C12orf29Q8N999 325 aa9□□□□□ -0.97
CLK1-201ENST00000321356 DTX3LQ8TDB6 740 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
CLK1-201ENST00000321356 UCMAQ8WVF2 138 aa9□□□□□ -0.97
CLK1-201ENST00000321356 FAM161BQ96MY7 647 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SPATA33Q96N06 139 aa9□□□□□ -0.97
CLK1-201ENST00000321356 QKIQ96PU8 341 aaKnown RBP eCLIP9□□□□□ -0.97
CLK1-201ENST00000321356 SIKE1Q9BRV8 207 aa9□□□□□ -0.97
CLK1-201ENST00000321356 TRIM56Q9BRZ2 755 aaKnown RBP9□□□□□ -0.97
CLK1-201ENST00000321356 C11orf84Q9BUA3 381 aaPredicted RBP9□□□□□ -0.97
CLK1-201ENST00000321356 SLC13A1Q9BZW2 595 aa9□□□□□ -0.97
CLK1-201ENST00000321356 R3HDMLQ9H3Y0 253 aa9□□□□□ -0.97
CLK1-201ENST00000321356 SMARCAD1Q9H4L7 1026 aa9□□□□□ -0.97
CLK1-201ENST00000321356 PCMTD2Q9NV79 361 aa9□□□□□ -0.97
CLK1-201ENST00000321356 THAP1Q9NVV9 213 aa9□□□□□ -0.97
CLK1-201ENST00000321356 DDX43Q9NXZ2 648 aaKnown RBP9□□□□□ -0.97
CLK1-201ENST00000321356 DNAJB4Q9UDY4 337 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms