RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CHD5Q8TDI0 1954 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SIGLEC16A6NMB1 481 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MEIS3P2A8K0S8 358 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MIF4GDA9UHW6 222 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 HHLA1C9JL84 531 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FOXN3O00409 490 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PES1O00541 588 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 NPC1O15118 1278 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 RGS9O75916 674 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 KRT5P13647 590 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 KIF11P52732 1056 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 VAV2P52735 878 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF33AQ06730 810 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PPP2R5DQ14738 602 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CLEC20AQ6ZU45 233 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 RRAGAQ7L523 313 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 TMC7Q7Z402 723 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 GLYCTKQ8IVS8 523 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM217AQ8IXS0 508 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FUKQ8N0W3 1084 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CPXM2Q8N436 756 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 KREMEN2Q8NCW0 462 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 BCL7CQ8WUZ0 217 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 RFFLQ8WZ73 363 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 NT5C3BQ969T7 300 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF668Q96K58 619 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 HEXIM2Q96MH2 286 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SERPINB11Q96P15 392 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ADAM7Q9H2U9 754 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SMOC2Q9H3U7 446 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 HAUS2Q9NVX0 235 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 IP6K2Q9UHH9 426 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 TSPAN16Q9UKR8 245 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ZKSCAN5Q9Y2L8 839 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 TCRBV5S1A1TA0A578 114 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 WDR27A2RRH5 827 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC38A8A6NNN8 435 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 KRT86O43790 486 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 IGLV3-25P01717 112 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CCDC175P0C221 793 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CASP14P31944 242 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 EIF2DP41214 584 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 HCAR3P49019 387 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 GPC5P78333 572 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC6A3Q01959 620 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PDCLQ13371 301 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 NAA30Q147X3 362 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 GOLGA7BQ2TAP0 167 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 C5orf22Q49AR2 442 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PAN2Q504Q3 1202 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MPP7Q5T2T1 576 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 DENND5BQ6ZUT9 1274 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CDR2LQ86X02 465 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC49Q8IUZ0 686 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC8AQ8IWT6 810 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 UNC45BQ8IWX7 931 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 OR10T2Q8NGX3 314 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM71BQ8TC56 605 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MAIP1Q8WWC4 291 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 CTNNBL1Q8WYA6 563 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 SUSD6Q92537 303 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 DNASE1L2Q92874 299 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 C18orf8Q96DM3 657 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PCED1BQ96HM7 432 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MSLNLQ96KJ4 702 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PPP1R13BQ96KQ4 1090 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ZNF512Q96ME7 567 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PPP1R2P1Q96PQ5 205 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 DEF6Q9H4E7 631 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 POLD4Q9HCU8 107 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 ASAH2Q9NR71 780 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 FAM207AQ9NSI2 230 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 DDX56Q9NY93 547 aaKnown RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 RNF14Q9UBS8 474 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 NAGPAQ9UK23 515 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 POLIQ9UNA4 740 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 PRG3Q9Y2Y8 225 aaPredicted RBP3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 MTCH2Q9Y6C9 303 aa3.45□□□□□ -1.86
SCAMP1-201ENST00000320280 M0QYV0 167 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PPEF2O14830 753 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 TEX28O15482 410 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PSTPIP1O43586 416 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 B4GALT3O60512 393 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 PRMT3O60678 531 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ECI2O75521 394 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 ALX3O95076 343 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 NDUFA10O95299 355 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 IGLV3-27P01718 113 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CNPP09543 421 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 USP17L7P0C7H9 530 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 HOXB4P17483 251 aaPredicted RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CTNNA2P26232 953 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 KLRC2P26717 231 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 YWHAQP27348 245 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 BRCC3P46736 316 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 DAOAP59103 153 aa3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 MRPS5P82675 430 aaKnown RBP3.44□□□□□ -1.86
SCAMP1-201ENST00000320280 CBX2Q14781 532 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms