RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 USP3Q9Y6I4 520 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 MYH10P35580 1976 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 PKD1L2Q7Z442 2459 aa14.98□□□□□ -0.01
RPP40-201ENST00000319533 ZFYVE26Q68DK2 2539 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 SPAARA0A1B0GVQ0 90 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 A0A1W2PQH9 124 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 H0Y626 953 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 OPHN1O60890 802 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 CILPO75339 1184 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 GJB3O75712 270 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 STC2O76061 302 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 TRIM16O95361 564 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 PENKP01210 267 aaPredicted RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 RARGP13631 454 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 CD59P13987 128 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 PFKFB1P16118 471 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 TRIM21P19474 475 aaKnown RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 ACO1P21399 889 aaKnown RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 ADORA2BP29275 332 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 DGKGP49619 791 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ZNF132P52740 706 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ATXN3P54252 364 aaPredicted RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 SLC14A1Q13336 389 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ENPP2Q13822 863 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 HNRNPDQ14103 355 aaKnown RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 DEFB119Q8N690 84 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 TRIML1Q8N9V2 468 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 APOBEC3GQ9HC16 384 aaKnown RBP14.97□□□□□ -0.01
RPP40-201ENST00000319533 CLIC5Q9NZA1 410 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 CYP8B1Q9UNU6 501 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ZNF510Q9Y2H8 683 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 FRMD4BQ9Y2L6 1034 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 ADAMTS9Q9P2N4 1935 aa14.97□□□□□ -0.01
RPP40-201ENST00000319533 A0A1B0GVL5 298 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 NPC1O15118 1278 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 MDM4O15151 490 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.01
RPP40-201ENST00000319533 CLSTN1O94985 981 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 KLKB1P03952 638 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 SYPP08247 313 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 SYKP43405 635 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 VAMP7P51809 220 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 SIM1P81133 766 aaPredicted RBP14.96□□□□□ -0.01
RPP40-201ENST00000319533 TADA2BQ86TJ2 420 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 MINDY1Q8N5J2 469 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 FAXDC2Q96IV6 333 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 HSPA12BQ96MM6 686 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
RPP40-201ENST00000319533 DUSP16Q9BY84 665 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 CACNA2D2Q9NY47 1150 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 RALYQ9UKM9 306 aaKnown RBP14.96□□□□□ -0.01
RPP40-201ENST00000319533 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 RAD54BQ9Y620 910 aa14.96□□□□□ -0.01
RPP40-201ENST00000319533 CACNA1GO43497 2377 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 DMXL2Q8TDJ6 3036 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 A0A1W2PQ27 194 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 A0A1W2PQ64 194 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 SRRM3A6NNA2 597 aaPredicted RBP14.95□□□□□ -0.02
RPP40-201ENST00000319533 WASH3PC4AMC7 463 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 CALUO43852 315 aaPredicted RBP14.95□□□□□ -0.02
RPP40-201ENST00000319533 FAM193AP78312 1265 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 PPP3CAQ08209 521 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 C10orf120Q5SQS8 335 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 FYB2Q5VWT5 728 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 CEP135Q66GS9 1140 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 INTS8Q75QN2 995 aaKnown RBP14.95□□□□□ -0.02
RPP40-201ENST00000319533 TAS1R2Q8TE23 839 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 DNASE2BQ8WZ79 361 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 FOXJ1Q92949 421 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 CDK5RAP1Q96SZ6 601 aaKnown RBP14.95□□□□□ -0.02
RPP40-201ENST00000319533 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 NIF3L1Q9GZT8 377 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 SLC6A17Q9H1V8 727 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 CD93Q9NPY3 652 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 ITM2CQ9NQX7 267 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 USP36Q9P275 1121 aaKnown RBP14.95□□□□□ -0.02
RPP40-201ENST00000319533 SUSD2Q9UGT4 822 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 NAGPAQ9UK23 515 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 NUDT5Q9UKK9 219 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 KLK13Q9UKR3 277 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 HPSEQ9Y251 543 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 STON1Q9Y6Q2 735 aa14.95□□□□□ -0.02
RPP40-201ENST00000319533 NDUFS2O75306 463 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 CAPNS1P04632 268 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 RALAP11233 206 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 CD6P30203 668 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 CHKAP35790 457 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 GCLMP48507 274 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 MFAP3P55082 362 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 COG7P83436 770 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 ZNF423Q2M1K9 1284 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 SYCP2LQ5T4T6 812 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 PPP1R26Q5T8A7 1209 aaPredicted RBP14.94□□□□□ -0.02
RPP40-201ENST00000319533 RAB44Q7Z6P3 723 aaPredicted RBP14.94□□□□□ -0.02
RPP40-201ENST00000319533 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
RPP40-201ENST00000319533 CADM4Q8NFZ8 388 aa14.94□□□□□ -0.02
RPP40-201ENST00000319533 OR2I1PQ8NGU4 316 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms