RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 EFTUD2Q15029 972 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRIM55-202ENST00000315962 PKDCCQ504Y2 493 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 THEMIS2Q5TEJ8 643 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 RTN4RL1Q86UN2 441 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-202ENST00000315962 DEFB106AQ8N104 65 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 NME8Q8N427 588 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 LRRC52Q8N7C0 313 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 CCDC89Q8N998 374 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 CENPTQ96BT3 561 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 SNF8Q96H20 258 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 GLT1D1Q96MS3 346 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 RBM15Q96T37 977 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRIM55-202ENST00000315962 TBCBQ99426 244 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 EBF2Q9HAK2 575 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 ETNK2Q9NVF9 386 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 ASNSD1Q9NWL6 643 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 DNAJB4Q9UDY4 337 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 SRRDQ9UH36 339 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 Q9Y3F1 56 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 SNX10Q9Y5X0 201 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 NUMBLQ9Y6R0 609 aa7.9□□□□□ -1.14
TRIM55-202ENST00000315962 YJEFN3A6XGL0 299 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 E7ENQ6 273 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 H7C0C1 242 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 GPR182O15218 404 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 OAS1P00973 400 aaKnown RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 KCNE1P15382 129 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ATP2A2P16615 1042 aaKnown RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ATP5OP48047 213 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 PGFP49763 221 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 TKTL1P51854 596 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 EIF3EP60228 445 aaKnown RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 GBE1Q04446 702 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 BNIP1Q12981 228 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 DARS2Q6PI48 645 aaKnown RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 LRRTM3Q86VH5 581 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ZBED8Q8IZ13 594 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ANKRD52Q8NB46 1076 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ZNF296Q8WUU4 475 aaPredicted RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 RSAD2Q8WXG1 361 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 CNPY3Q9BT09 278 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 SNRNP25Q9BV90 132 aaKnown RBP7.9□□□□□ -1.15
TRIM55-202ENST00000315962 TMLHEQ9NVH6 421 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 ARL2BPQ9Y2Y0 163 aa7.9□□□□□ -1.15
TRIM55-202ENST00000315962 A0A1W2PPM1 405 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PQBP1O60828 265 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 AP1G2O75843 785 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SOAT2O75908 522 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TOMM70O94826 608 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 KRT7P08729 469 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CKBP12277 381 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 GOT1P17174 413 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 KRT15P19012 456 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 IL4RP24394 825 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 AXLP30530 894 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 HOXC8P31273 242 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 BST2Q10589 180 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 DPYSL3Q14195 570 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CRYMQ14894 314 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SLMAPQ14BN4 828 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 MTFR1Q15390 333 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PKN2Q16513 984 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SV2CQ496J9 727 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 RFWD3Q6PCD5 774 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CLEC20AQ6ZU45 233 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 RNF180Q86T96 592 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TMEM110Q86TL2 294 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 P3H4Q92791 437 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PRR11Q96HE9 360 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SCLYQ96I15 445 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 ZNF560Q96MR9 790 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 RSAD1Q9HA92 442 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 LRRC4Q9HBW1 653 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SAYSD1Q9NPB0 183 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 STARD7Q9NQZ5 370 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 NKIRAS1Q9NYS0 192 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 NEU2Q9Y3R4 380 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CITO14578 2027 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 M0QYT0 321 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CAPN9O14815 690 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TTC4O95801 387 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 NCAM1P13591 858 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TAC1P20366 129 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 AMPD1P23109 780 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 KLRC2P26717 231 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 GABRB2P47870 512 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CTCFP49711 727 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CCL23P55773 120 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 UPP1Q16831 310 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 MSS51Q4VC12 460 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 BSPRYQ5W0U4 402 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CAPRIN2Q6IMN6 1127 aaKnown RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 CCSAPQ6IQ19 270 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-202ENST00000315962 NT5DC4Q86YG4 428 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 TTC16Q8NEE8 873 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 SLC7A14Q8TBB6 771 aa7.89□□□□□ -1.15
TRIM55-202ENST00000315962 DTX3LQ8TDB6 740 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms