RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 RNF157Q96PX1 679 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PIDD1Q9HB75 910 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 INTS9Q9NV88 658 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 SENP1Q9P0U3 644 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 NUP205Q92621 2012 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ARHGEF35A5YM69 484 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PPEF2O14830 753 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 CHMP2AO43633 222 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 NFICP08651 508 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 GLUD2P49448 558 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 GALNT2Q10471 571 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 SGO2Q562F6 1265 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 DHRS4L2Q6PKH6 230 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PPIL6Q8IXY8 311 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ANKRD35Q8N283 1001 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 METTL25Q8N6Q8 603 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TMEM102Q8N9M5 508 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 SP7Q8TDD2 431 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TCP10LQ8TDR4 215 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TFB1MQ8WVM0 346 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PCDH18Q9HCL0 1135 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 DPPA5A6NC42 116 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 BIRC5O15392 142 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TSPAN1O60635 241 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 CD58P19256 250 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 AMPD1P23109 780 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PTPN4P29074 926 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 CCND2P30279 289 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 MIPP30301 263 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 GRK4P32298 578 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PTDSS1P48651 473 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ACOT2P49753 483 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 CDK16Q00536 496 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 MMRN1Q13201 1228 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PMF1Q6P1K2 205 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TRMT10BQ6PF06 316 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 MTHFD1LQ6UB35 978 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 UNC5AQ6ZN44 842 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 GPR155Q7Z3F1 870 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 CYP2S1Q96SQ9 504 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TARS2Q9BW92 718 aaKnown RBP8.14□□□□□ -1.11
CNOT4-201ENST00000315544 MTMR12Q9C0I1 747 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 RNPEPQ9H4A4 650 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ETNK2Q9NVF9 386 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 NMRK1Q9NWW6 199 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 ZNF639Q9UID6 485 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 DERAQ9Y315 318 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 PSAT1Q9Y617 370 aa8.14□□□□□ -1.11
CNOT4-201ENST00000315544 TRDMT1O14717 391 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 VILLO15195 856 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ITM2AO43736 263 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ZBTB14O43829 449 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 DUSP11O75319 330 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 AVILO75366 819 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 MICAL2O94851 1124 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 BRAFP15056 766 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 GNA15P30679 374 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 GRIA1P42261 906 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 OTUD4Q01804 1114 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 NCOA4Q13772 614 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 UGT3A2Q3SY77 523 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 FAM182AQ5T1J6 154 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PPP1R2P3Q6NXS1 205 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 METTL7BQ6UX53 244 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 NPNTQ6UXI9 565 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 MAPK15Q8TD08 544 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 APBB2Q92870 758 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 TTC25Q96NG3 672 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PAFAH2Q99487 392 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 NIF3L1Q9GZT8 377 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 SMYD3Q9H7B4 428 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 KMT5AQ9NQR1 393 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CPA4Q9UI42 421 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 MED16Q9Y2X0 877 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PRSS51A0A1B0GVH4 220 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 MOXD2PA6NHM9 499 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CBX6O95503 412 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 TKTP29401 623 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CCND3P30281 292 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 LRIT3Q3SXY7 679 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PDSS2Q86YH6 399 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 FAM126BQ8IXS8 530 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ZMIZ2Q8NF64 920 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ACTL9Q8TC94 416 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 UCMAQ8WVF2 138 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 C9orf72Q96LT7 481 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CD300AQ9UGN4 299 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ADAMTS6Q9UKP5 1117 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 C2orf71A6NGG8 1288 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 GAS2O43903 313 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ACSL3O95573 720 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 MYCNP04198 464 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms