RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.08■■□□□ 1.28
SNUPN-201ENST00000308588 GTSE1Q9NYZ3 720 aa23.08■■□□□ 1.28
SNUPN-201ENST00000308588 WDR35Q9P2L0 1181 aa23.08■■□□□ 1.28
SNUPN-201ENST00000308588 OTOL1A6NHN0 477 aaPredicted RBP23.07■■□□□ 1.28
SNUPN-201ENST00000308588 DLL1O00548 723 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 IGLV3-25P01717 112 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 IFNAR2P48551 515 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 TRIP4Q15650 581 aaPredicted RBP23.07■■□□□ 1.28
SNUPN-201ENST00000308588 SLC44A4Q53GD3 710 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 PPP1R2P3Q6NXS1 205 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 Q6ZNB5 142 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 TAC4Q86UU9 113 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 BBS7Q8IWZ6 715 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 ADGRG2Q8IZP9 1017 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 ADAM32Q8TC27 787 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 HEBP1Q9NRV9 189 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 ZNHIT6Q9NWK9 470 aaKnown RBP23.07■■□□□ 1.28
SNUPN-201ENST00000308588 TBC1D14Q9P2M4 693 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 FBXL21Q9UKT6 434 aa23.07■■□□□ 1.28
SNUPN-201ENST00000308588 TECTAO75443 2155 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 A0A087X0T9 212 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 KRBA1A5PL33 1030 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 SLC9A3R1O14745 358 aaPredicted RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 RTN2O75298 545 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 IGLV3-27P01718 113 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 FTLP02792 175 aaPredicted RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 FAM228BP0C875 321 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 NOS2P35228 1153 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 EIF4A3P38919 411 aaKnown RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 MATKP42679 507 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 EIF4EBP2Q13542 120 aaPredicted RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 RUNX3Q13761 415 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 ARCQ7LC44 396 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 VPS36Q86VN1 386 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 PLD4Q96BZ4 506 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 VCPIP1Q96JH7 1222 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 CHP1Q99653 195 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 ISCUQ9H1K1 167 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 METTL5Q9NRN9 209 aaKnown RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 LSM7Q9UK45 103 aaKnown RBP23.06■■□□□ 1.28
SNUPN-201ENST00000308588 CA14Q9ULX7 337 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 COL4A2P08572 1712 aa23.06■■□□□ 1.28
SNUPN-201ENST00000308588 TICRRQ7Z2Z1 1910 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 TCRBV5S1A1TA0A578 114 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 TRUB2O95900 331 aaKnown RBP23.05■■□□□ 1.28
SNUPN-201ENST00000308588 CDC25BP30305 580 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 FLT3P36888 993 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 KPNA1P52294 538 aaPredicted RBP23.05■■□□□ 1.28
SNUPN-201ENST00000308588 MAPK8IP2Q13387 824 aaPredicted RBP23.05■■□□□ 1.28
SNUPN-201ENST00000308588 NNTQ13423 1086 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 ASTE1Q2TB18 679 aaPredicted RBP23.05■■□□□ 1.28
SNUPN-201ENST00000308588 TRNP1Q6NT89 227 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 C3orf20Q8ND61 904 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 TTC8Q8TAM2 541 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 CSGALNACT1Q8TDX6 532 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 SERPINB11Q96P15 392 aa23.05■■□□□ 1.28
SNUPN-201ENST00000308588 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNUPN-201ENST00000308588 SSU72P8A0A1W2PR75 194 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 GJB6O95452 261 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 RRM1P23921 792 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 CORO1AP31146 461 aaKnown RBP23.04■■□□□ 1.28
SNUPN-201ENST00000308588 TBX4P57082 545 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 CDK17Q00537 523 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 ITPRIPL2Q3MIP1 535 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 ATP2A3Q93084 1043 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 NT5C3BQ969T7 300 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 OTUB2Q96DC9 234 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 SLC39A13Q96H72 371 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 NPY6RQ99463 290 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 DDX23Q9BUQ8 820 aaKnown RBP23.04■■□□□ 1.28
SNUPN-201ENST00000308588 ADAM33Q9BZ11 813 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 DCLK3Q9C098 648 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 ECT2Q9H8V3 914 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 ARHGEF3Q9NR81 526 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 TLR6Q9Y2C9 796 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 CUL9Q8IWT3 2517 aa23.04■■□□□ 1.28
SNUPN-201ENST00000308588 SHISA7A6NL88 538 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 IRAK2O43187 625 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 RING1Q06587 406 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 MLF2Q15773 248 aaPredicted RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 OTUD1Q5VV17 481 aaPredicted RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 DENND1CQ8IV53 801 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 SIX5Q8N196 739 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 EMC1Q8N766 993 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 JOSD2Q8TAC2 188 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 FCRL2Q96LA5 508 aaPredicted RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 CALCOCO1Q9P1Z2 691 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 AGO1Q9UL18 857 aaKnown RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 NENFQ9UMX5 172 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 SIGLEC16A6NMB1 481 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 KRT3P12035 628 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 SOX9P48436 509 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 MLLT6P55198 1093 aaPredicted RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 ALKBH5Q6P6C2 394 aaKnown RBP23.03■■□□□ 1.28
SNUPN-201ENST00000308588 RRN3Q9NYV6 651 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 ZNF510Q9Y2H8 683 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 PIAS3Q9Y6X2 628 aa23.03■■□□□ 1.28
SNUPN-201ENST00000308588 COL4A3Q01955 1670 aa23.02■■□□□ 1.28
SNUPN-201ENST00000308588 TMEM221A6NGB7 291 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms