RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 DPEP3Q9H4B8 488 aa12.51□□□□□ -0.41
SMIM4-201ENST00000307106 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
SMIM4-201ENST00000307106 PLK2Q9NYY3 685 aa12.51□□□□□ -0.41
SMIM4-201ENST00000307106 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
SMIM4-201ENST00000307106 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 TLR5O60602 858 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 WISP1O95388 367 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 LDOC1O95751 146 aaPredicted RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 TNNC2P02585 160 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ZDHHC11BP0C7U3 371 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ACO1P21399 889 aaKnown RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 GARTP22102 1010 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ACSL1P33121 698 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 DDIT3P35638 169 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 UBA7P41226 1012 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 CTSKP43235 329 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 SLC5A3P53794 718 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 GEN1Q17RS7 908 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 KCNT1Q5JUK3 1230 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ARL6IP4Q66PJ3 421 aaKnown RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 FBXL19Q6PCT2 694 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ADAT2Q7Z6V5 191 aaKnown RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 B3GALNT2Q8NCR0 500 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 BIRC7Q96CA5 298 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 AK8Q96MA6 479 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 LGMNQ99538 433 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
SMIM4-201ENST00000307106 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
SMIM4-201ENST00000307106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
SMIM4-201ENST00000307106 A0A1B0GTQ1 180 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 SLC28A2O43868 658 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 DFNA5O60443 496 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 TACC1O75410 805 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 PRKCHP24723 683 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 ACADVLP49748 655 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 MFAP3P55082 362 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 TMPRSS3P57727 454 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 LY6DQ14210 128 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 ZNF234Q14588 700 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
SMIM4-201ENST00000307106 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
SMIM4-201ENST00000307106 ACCSQ96QU6 501 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 PCIF1Q9H4Z3 704 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 IL37Q9NZH6 218 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
SMIM4-201ENST00000307106 ATP8B3O60423 1300 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 FAM92AA1XBS5 289 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 A8MXQ7 604 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
SMIM4-201ENST00000307106 SEMA4FO95754 770 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 TBX18O95935 607 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 EPHX1P07099 455 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 C6P13671 934 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 CD27P26842 260 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 PGFP49763 221 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 SRSF1Q07955 248 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMIM4-201ENST00000307106 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 BROXQ5VW32 411 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 DYMQ7RTS9 669 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 SYCP3Q8IZU3 236 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 NAF1Q96HR8 494 aaKnown RBP12.48□□□□□ -0.41
SMIM4-201ENST00000307106 LHX5Q9H2C1 402 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
SMIM4-201ENST00000307106 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
SMIM4-201ENST00000307106 TSPAN3O60637 253 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 FSBPO95073 299 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 GCNT3O95395 438 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 ITGAVP06756 1048 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 ABCB4P21439 1286 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
SMIM4-201ENST00000307106 C21orf59P57076 290 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 TNNC1P63316 161 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 E2F5Q15329 346 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 PRAMEF14Q5SWL7 426 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 EID2Q8N6I1 236 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 OR2T3Q8NH03 318 aa12.47□□□□□ -0.41
SMIM4-201ENST00000307106 TSC1Q92574 1164 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms