RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 HPS4Q9NQG7 708 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 STAP1Q9ULZ2 295 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 BZW2Q9Y6E2 419 aaKnown RBP11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 KANSL1LA0AUZ9 987 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SPECC1L-ADORA2AF8WAN1 911 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NCAM2O15394 837 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 MSI1O43347 362 aaKnown RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 APOEP02649 317 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SERPING1P05155 500 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ADH5P11766 374 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 MMP8P22894 467 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 GBP1P32455 592 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CTHP32929 405 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SOX9P48436 509 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 MLLT6P55198 1093 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TBX4P57082 545 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 STARD6P59095 220 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NNTQ13423 1086 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 HTR3DQ70Z44 454 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TMC6Q7Z403 805 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 BMP8AQ7Z5Y6 402 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 XYLT1Q86Y38 959 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 FBXL6Q8N531 539 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SLC30A5Q8TAD4 765 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DQX1Q8TE96 717 aaKnown RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 METTL5Q9NRN9 209 aaKnown RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ADAM22Q9P0K1 906 aa11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NDRG2Q9UN36 371 aaKnown RBP11.47□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ANKRD62A6NC57 917 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 LATS1O95835 1130 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CYBBP04839 570 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CYP17A1P05093 508 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SKILP12757 684 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DESP17661 470 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NOS2P35228 1153 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CHKAP35790 457 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SULT1E1P49888 294 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 GAD2Q05329 585 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 RING1Q06587 406 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DHCR24Q15392 516 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TAF5Q15542 800 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ANO4Q32M45 955 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 C2CD6Q53TS8 623 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 IER5LQ5T953 404 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CWF19L1Q69YN2 538 aaKnown RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ACAD10Q6JQN1 1059 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 Q6ZNB5 142 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ZNF571Q7Z3V5 609 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 PHF13Q86YI8 300 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DENND1CQ8IV53 801 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 CNGA4Q8IV77 575 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 PJA1Q8NG27 643 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 RNF34Q969K3 372 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SLC2A13Q96QE2 648 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 PCDHB18PQ96TA0 734 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 NELL2Q99435 816 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SELENOOQ9BVL4 669 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 FOXQ1Q9C009 403 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 LINC00597Q9H2U6 94 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DEF6Q9H4E7 631 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 LTB4R2Q9NPC1 389 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 DDIT4Q9NX09 232 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 COX16Q9P0S2 106 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 TLR6Q9Y2C9 796 aa11.46□□□□□ -0.57
CSPG4P2Y-201ENST00000306853 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 TYW5A2RUC4 315 aaKnown RBP11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 IRAK2O43187 625 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 MFAP3LO75121 409 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 TRUB2O95900 331 aaKnown RBP11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 FYNP06241 537 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 CD72P21854 359 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 GJA4P35212 333 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 MATKP42679 507 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 SLC11A2P49281 568 aa11.45□□□□□ -0.58
CSPG4P2Y-201ENST00000306853 ZNF75DP51815 510 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms