RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 BHLHE22Q8NFJ8 381 aaPredicted RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 TSPAN14Q8NG11 270 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 GCOM2Q9BZD3 368 aaPredicted RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 TCF7L2Q9NQB0 619 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 INO80B-WBP1J3KQ70 363 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 AKAP10O43572 662 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 UGT1A9O60656 530 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 HPCAP84074 193 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 GPR141Q7Z602 305 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 OLIG1Q8TAK6 271 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 BTBD9Q96Q07 612 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 INO80BQ9C086 356 aaPredicted RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 UGT1A7Q9HAW7 530 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 UGT1A10Q9HAW8 530 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 UGT1A8Q9HAW9 530 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ARHGEF38Q9NXL2 777 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 EURLQ9NYK6 297 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 DCDC2Q9UHG0 476 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 RAD17O75943 681 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ZFXP17010 805 aaPredicted RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 FGFR3P22607 806 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 SDC4P31431 198 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ABCD1P33897 745 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 CBX3Q13185 183 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 SLC35B2Q8TB61 432 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 GTSE1Q9NYZ3 720 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 AURKCQ9UQB9 309 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 TAF1P21675 1872 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 MYOCOSA0A1B0GUC4 107 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 TTC36A6NLP5 189 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 CSPG5O95196 566 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 TSHRP16473 764 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 SLC12A2P55011 1212 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 LAYNQ6UX15 382 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 KYAT3Q6YP21 454 aaKnown RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 ARCQ7LC44 396 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 IGDCC3Q8IVU1 814 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 SP8Q8IXZ3 490 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 UBA3Q8TBC4 463 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 MASTLQ96GX5 879 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 DRC3Q9H069 523 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 C6orf203Q9P0P8 240 aaPredicted RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 LSM8O95777 96 aaKnown RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 P4HA1P13674 534 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 RGS7P49802 495 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 CRADDP78560 199 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 IFRD2Q12894 506 aaPredicted RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 LPIN1Q14693 890 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 DDHD1Q8NEL9 900 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
TRIM35-201ENST00000305364 RSL24D1Q9UHA3 163 aaKnown RBP13.44□□□□□ -0.26
TRIM35-201ENST00000305364 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 CCND2P30279 289 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PRKCEQ02156 737 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PDK1Q15118 436 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PTAR1Q7Z6K3 402 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 DCLK2Q8N568 766 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 AGAP3Q96P47 875 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ILKAPQ9H0C8 392 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 C17orf75Q9HAS0 396 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 MID2Q9UJV3 735 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ITGA11Q9UKX5 1188 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 SH3GLB1Q9Y371 365 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 TOP3BO95985 862 aaKnown RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ARL4AP40617 200 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 NOVP48745 357 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 PLOD1Q02809 727 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 ZC3H12AQ5D1E8 599 aaKnown RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 TTC33Q6PID6 262 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 HSPBAP1Q96EW2 488 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 HESX1Q9UBX0 185 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 NUMBLQ9Y6R0 609 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 CCDC78A2IDD5 438 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 CXorf49A8MYA2 514 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-201ENST00000305364 TPP1O14773 563 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 TPST1O60507 370 aa13.43□□□□□ -0.26
TRIM35-201ENST00000305364 NUP107P57740 925 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms