RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TASP1Q9H6P5 420 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 SYNJ2BP-COX16A0A087WUM0 186 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 TRUB2O95900 331 aaKnown RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 DDX6P26196 483 aaKnown RBP eCLIP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 HADHBP55084 474 aaKnown RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 KLHDC10Q6PID8 442 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 TADA2BQ86TJ2 420 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 CCAR2Q8N163 923 aaKnown RBP28.31■■■□□ 2.12
HDAC3-201ENST00000305264 FGF13Q92913 245 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 CNPY3Q9BT09 278 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 FAM204AQ9H8W3 233 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 MARCH2Q9P0N8 246 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 COX16Q9P0S2 106 aa28.31■■■□□ 2.12
HDAC3-201ENST00000305264 M0QYT0 321 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 MYO1FO00160 1098 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 IGLV3-25P01717 112 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 HDCP19113 662 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 DAB2IPQ5VWQ8 1189 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 KIAA1524Q8TCG1 905 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 DDIT4Q9NX09 232 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 DNMT3LQ9UJW3 386 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 NUP210Q8TEM1 1887 aaPredicted RBP28.3■■■□□ 2.12
HDAC3-201ENST00000305264 TRAV19A0A0A6YYK7 116 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 MOCS3O95396 460 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 CKMP06732 381 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 NAP1L1P55209 391 aaKnown RBP28.3■■■□□ 2.12
HDAC3-201ENST00000305264 SMAD4Q13485 552 aaKnown RBP28.3■■■□□ 2.12
HDAC3-201ENST00000305264 BNIPLQ7Z465 357 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 CPNE8Q86YQ8 564 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 TPCN2Q8NHX9 752 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 FAM172AQ8WUF8 416 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 SMG9Q9H0W8 520 aaKnown RBP28.3■■■□□ 2.12
HDAC3-201ENST00000305264 GOLPH3Q9H4A6 298 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 RRN3Q9NYV6 651 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 IP6K2Q9UHH9 426 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 ZKSCAN5Q9Y2L8 839 aa28.3■■■□□ 2.12
HDAC3-201ENST00000305264 TMEM110-MUSTN1A8MSY1 372 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 MBL2P11226 248 aaPredicted RBP28.29■■■□□ 2.12
HDAC3-201ENST00000305264 ATXN1P54253 815 aaKnown RBP28.29■■■□□ 2.12
HDAC3-201ENST00000305264 NME3Q13232 169 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 MESDQ14696 234 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 CMTM8Q8IZV2 173 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 NECTIN4Q96NY8 510 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 SMPD4Q9NXE4 827 aa28.29■■■□□ 2.12
HDAC3-201ENST00000305264 IRAK2O43187 625 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 MBTPS2O43462 519 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 BUB1BO60566 1050 aaPredicted RBP28.28■■■□□ 2.12
HDAC3-201ENST00000305264 CENPIQ92674 756 aaPredicted RBP28.28■■■□□ 2.12
HDAC3-201ENST00000305264 ZFRQ96KR1 1074 aaKnown RBP28.28■■■□□ 2.12
HDAC3-201ENST00000305264 PRDM6Q9NQX0 595 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 PIGVQ9NUD9 493 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 CAPN6Q9Y6Q1 641 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 ARFGAP1Q8N6T3 406 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 SERPINB11Q96P15 392 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 CPQQ9Y646 472 aa28.28■■■□□ 2.12
HDAC3-201ENST00000305264 PROSCO94903 275 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 PFKLP17858 780 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 HDAC4P56524 1084 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 ZXDBP98169 803 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 EIF4EBP2Q13542 120 aaPredicted RBP28.27■■■□□ 2.12
HDAC3-201ENST00000305264 NIPA2Q8N8Q9 360 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 PGAP3Q96FM1 320 aaPredicted RBP28.27■■■□□ 2.12
HDAC3-201ENST00000305264 MYADMQ96S97 322 aa28.27■■■□□ 2.12
HDAC3-201ENST00000305264 SLC12A8A0AV02 714 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 PRAMEF12O95522 483 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 AVPR1AP37288 418 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 SLC7A9P82251 487 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 PIGHQ14442 188 aaPredicted RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 ZSCAN18Q8TBC5 510 aaPredicted RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 GKN1Q9NS71 199 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 CDH7Q9ULB5 785 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 CCL26Q9Y258 94 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 GRID2IPA4D2P6 1211 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 SOBPA7XYQ1 873 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 HMBSP08397 361 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 RDXP35241 583 aaKnown RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 DEUP1Q05D60 604 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 STRADAQ7RTN6 431 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 RNF10Q8N5U6 811 aaKnown RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 KLF16Q9BXK1 252 aaPredicted RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 IRX2Q9BZI1 471 aaPredicted RBP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.26■■■□□ 2.11
HDAC3-201ENST00000305264 ZMYM5Q9UJ78 669 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 USTQ9Y2C2 406 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 HYOU1Q9Y4L1 999 aa28.26■■■□□ 2.11
HDAC3-201ENST00000305264 LRCH4O75427 683 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 ENDOD1O94919 500 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 TFF2Q03403 129 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 LEXMQ3ZCV2 418 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.25■■■□□ 2.11
HDAC3-201ENST00000305264 GDE1Q9NZC3 331 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 TLR6Q9Y2C9 796 aa28.25■■■□□ 2.11
HDAC3-201ENST00000305264 TCF4P15884 667 aa28.24■■■□□ 2.11
HDAC3-201ENST00000305264 SP100P23497 879 aaPredicted RBP28.24■■■□□ 2.11
HDAC3-201ENST00000305264 TRIP4Q15650 581 aaPredicted RBP28.24■■■□□ 2.11
HDAC3-201ENST00000305264 LRRC57Q8N9N7 239 aa28.24■■■□□ 2.11
HDAC3-201ENST00000305264 USP13Q92995 863 aaPredicted RBP28.24■■■□□ 2.11
HDAC3-201ENST00000305264 KCND1Q9NSA2 647 aa28.24■■■□□ 2.11
HDAC3-201ENST00000305264 GBP1P32455 592 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms