RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SCARA5Q6ZMJ2 495 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 ATG14Q6ZNE5 492 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 DEPDC1BQ8WUY9 529 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 SH3GLB1Q9Y371 365 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 CNTNAP2Q9UHC6 1331 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 APOC4-APOC2K7ER74 178 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 BIRC5O15392 142 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 APOEP02649 317 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 APOC2P02655 101 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 STT3AP46977 705 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 MTTPP55157 894 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 CDK18Q07002 472 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 PSMD6Q15008 389 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 UNC5AQ6ZN44 842 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 AHI1Q8N157 1196 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 WDTC1Q8N5D0 677 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 PLAC1Q9HBJ0 212 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 RBAKQ9NYW8 714 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 DGKIO75912 1065 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 FGF3P11487 239 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 GARTP22102 1010 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 SERPINB5P36952 375 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 NUDT2P50583 147 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 MBLAC2Q68D91 279 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 ARCQ7LC44 396 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 UNC5BQ8IZJ1 945 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 ZNF180Q9UJW8 692 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 NFIBO00712 420 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 FBXO21O94952 628 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 L1CAMP32004 1257 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 NR1H2P55055 460 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 PKNOX1P55347 436 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 TAS1R3Q7RTX0 852 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 C10orf107Q8IVU9 208 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 MPP5Q8N3R9 675 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 DDI1Q8WTU0 396 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 CCT7Q99832 543 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 RNPEPQ9H4A4 650 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 PAIP2BQ9ULR5 123 aaKnown RBP13.45□□□□□ -0.26
TVP23A-201ENST00000299866 HEY1Q9Y5J3 304 aa13.45□□□□□ -0.26
TVP23A-201ENST00000299866 CD19P15391 556 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 ABCD1P33897 745 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 MCCD1P59942 119 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 MPP3Q13368 585 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 FLOT2Q14254 428 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CPXCR1Q8N123 301 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 TFAP2BQ92481 460 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 USP13Q92995 863 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 ZNF696Q9H7X3 374 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 ZBTB14O43829 449 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CCNE2O96020 404 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CST3P01034 146 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 SERPINB2P05120 415 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 TBXAS1P24557 533 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CCR3P51677 355 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 PSMC1P62191 440 aaKnown RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 C16orf72Q14CZ0 275 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 FNDC8Q8TC99 324 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 IRGQQ8WZA9 623 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 THEGQ9P2T0 379 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 RSL24D1Q9UHA3 163 aaKnown RBP13.44□□□□□ -0.26
TVP23A-201ENST00000299866 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 SSX2IPQ9Y2D8 614 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 FOCADQ5VW36 1801 aa13.44□□□□□ -0.26
TVP23A-201ENST00000299866 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 LYPLA2O95372 231 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CDH6P55285 790 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ADGRE1Q14246 886 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 NRF1Q16656 503 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PPP1R2P3Q6NXS1 205 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 FAM196AQ6ZSG2 479 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CAND1Q86VP6 1230 aaKnown RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CHURC1Q8WUH1 139 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 MAML3Q96JK9 1138 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms