RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TUT1Q9H6E5 874 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 AFF4Q9UHB7 1163 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GPSM3Q9Y4H4 160 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 OR6C70A6NIJ9 312 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CLPXO76031 633 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ALX3O95076 343 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CFBP00751 764 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 PSMA4P25789 261 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ACADSBP45954 432 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 EPHA7Q15375 998 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 PLEKHG6Q3KR16 790 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 LINC00469Q8N7U9 141 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ZSCAN18Q8TBC5 510 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NSUN6Q8TEA1 469 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 TCEAL3Q969E4 200 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CDRT15Q96T59 188 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 LPIN3Q9BQK8 851 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 MXD3Q9BW11 206 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 IL25Q9H293 177 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 TM9SF1O15321 606 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NUAK1O60285 661 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ITGB3P05106 788 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 COILP38432 576 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ERVK-8P63133 956 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 LRRC41Q15345 812 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CA9Q16790 459 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 AARS2Q5JTZ9 985 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ANKS6Q68DC2 871 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 BHLHE22Q8NFJ8 381 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 RAB2BQ8WUD1 216 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 AFG1LQ8WV93 481 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 PPP1R36Q96LQ0 422 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 PPP1R2P1Q96PQ5 205 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 TBCBQ99426 244 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 HPSEQ9Y251 543 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ERGIC3Q9Y282 383 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 REXO2Q9Y3B8 237 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 UGT2B4P06133 528 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 SPATA31D3P0C874 917 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 M6PRP20645 277 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 UQCRC1P31930 480 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NAPAP54920 295 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 RAB25P57735 213 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ALDH6A1Q02252 535 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 DPYDQ12882 1025 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 BNIP2Q12982 314 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 DGCR6Q14129 220 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CCDC157Q569K6 752 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 GPATCH4Q5T3I0 446 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 FBXL13Q8NEE6 735 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 RIN3Q8TB24 985 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 DBNDD2Q9BQY9 259 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ACTL7BQ9Y614 415 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NOS1P29475 1434 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 KPNA7A9QM74 516 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CES2O00748 559 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CDH2P19022 906 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 TNNI1P19237 187 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 SAT1P21673 171 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 GPR85P60893 370 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 RRP1BQ14684 758 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 LRRC24Q50LG9 513 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 CRTC1Q6UUV9 634 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 HAUS6Q7Z4H7 955 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 SLC51BQ86UW2 128 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 BRSK1Q8TDC3 778 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 NXNL1Q96CM4 212 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ISOC1Q96CN7 298 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ZHX1-C8orf76Q96EF9 292 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 ZC3H10Q96K80 434 aaKnown RBP12.06□□□□□ -0.48
SNIP1-201ENST00000296215 KLF15Q9UIH9 416 aa12.06□□□□□ -0.48
SNIP1-201ENST00000296215 PLK4O00444 970 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ADRA1DP25100 572 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ADSSP30520 456 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 COG2Q14746 738 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 FUT11Q495W5 492 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ASRGL1Q7L266 308 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 SGF29Q96ES7 293 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 WNT8AQ9H1J5 351 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 CAB39LQ9H9S4 337 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 NTN4Q9HB63 628 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 SNX6Q9UNH7 406 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ABCB1P08183 1280 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms