RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SERPINB11Q96P15 392 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 SEPT11Q9NVA2 429 aaKnown RBP28.08■■■□□ 2.09
SSU72-201ENST00000291386 WDR35Q9P2L0 1181 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 PIAS3Q9Y6X2 628 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 MAN2B1O00754 1011 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 DAB1O75553 588 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 SERPING1P05155 500 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 SKILP12757 684 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 ACAD10Q6JQN1 1059 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 MMS22LQ6ZRQ5 1243 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 TPRG1Q6ZUI0 275 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 RALGPS2Q86X27 583 aaPredicted RBP28.07■■■□□ 2.08
SSU72-201ENST00000291386 BBS7Q8IWZ6 715 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 DEFB106AQ8N104 65 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 SLC30A5Q8TAD4 765 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 MRFAP1L1Q96HT8 127 aa28.07■■■□□ 2.08
SSU72-201ENST00000291386 OTOL1A6NHN0 477 aaPredicted RBP28.06■■■□□ 2.08
SSU72-201ENST00000291386 IGLV3-25P01717 112 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 IGLV3-27P01718 113 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 CALB1P05937 261 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 TPM1P09493 284 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 GZMAP12544 262 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 ZNF75DP51815 510 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 RING1Q06587 406 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 C1QBPQ07021 282 aaKnown RBP28.06■■■□□ 2.08
SSU72-201ENST00000291386 TBX2Q13207 712 aaPredicted RBP28.06■■■□□ 2.08
SSU72-201ENST00000291386 EIF4EBP2Q13542 120 aaPredicted RBP28.06■■■□□ 2.08
SSU72-201ENST00000291386 TMEM31Q5JXX7 168 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 PBXIP1Q96AQ6 731 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 DNAJC7Q99615 494 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 C11orf70Q9BRQ4 267 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 ADAM22Q9P0K1 906 aa28.06■■■□□ 2.08
SSU72-201ENST00000291386 DDX3XO00571 662 aaKnown RBP eCLIP28.05■■■□□ 2.084e-13■■■■■ 50.3
SSU72-201ENST00000291386 PDGFBP01127 241 aaPredicted RBP28.05■■■□□ 2.08
SSU72-201ENST00000291386 KLKB1P03952 638 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 NOS2P35228 1153 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 COL4A3Q01955 1670 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 NR1H3Q13133 447 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 C2CD6Q53TS8 623 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 DCAF6Q58WW2 860 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 FAM102AQ5T9C2 384 aaPredicted RBP28.05■■■□□ 2.08
SSU72-201ENST00000291386 ZNF852Q6ZMS4 543 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 MON1BQ7L1V2 547 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 OR8K1Q8NGG5 319 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 VCPIP1Q96JH7 1222 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 TBC1D17Q9HA65 648 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 RRN3Q9NYV6 651 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 TMEM59LQ9UK28 342 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 TLR6Q9Y2C9 796 aa28.05■■■□□ 2.08
SSU72-201ENST00000291386 KANSL1LA0AUZ9 987 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 FAM86C2PA6NEL3 165 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 SPECC1L-ADORA2AF8WAN1 911 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 MSI1O43347 362 aaKnown RBP28.04■■■□□ 2.08
SSU72-201ENST00000291386 GRAP2O75791 330 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 LATS1O95835 1130 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 CYP17A1P05093 508 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 HMBSP08397 361 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 CORO1AP31146 461 aaKnown RBP28.04■■■□□ 2.08
SSU72-201ENST00000291386 CTHP32929 405 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 MATKP42679 507 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 AMPD2Q01433 879 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 DHCR24Q15392 516 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 TAC4Q86UU9 113 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 SLC39A13Q96H72 371 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 MFSD1Q9H3U5 465 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 STOML2Q9UJZ1 356 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 F5P12259 2224 aa28.04■■■□□ 2.08
SSU72-201ENST00000291386 SCAMP3O14828 347 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 IRAK2O43187 625 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 TRUB2O95900 331 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 GJA4P35212 333 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 SOX9P48436 509 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 HARS2P49590 506 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 TBX4P57082 545 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 CDK17Q00537 523 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 TDRD12Q587J7 1177 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 NUGGCQ68CJ6 796 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 CWF19L1Q69YN2 538 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 RHBDF2Q6PJF5 856 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 TMC6Q7Z403 805 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 UNC45BQ8IWX7 931 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 FAM217AQ8IXS0 508 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 FBXL6Q8N531 539 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 TTC8Q8TAM2 541 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 NT5C3BQ969T7 300 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 AZIN2Q96A70 460 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 CHFRQ96EP1 664 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 NELL2Q99435 816 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 OSBPL6Q9BZF3 934 aa28.03■■■□□ 2.08
SSU72-201ENST00000291386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSU72-201ENST00000291386 AGO1Q9UL18 857 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 MRPS17Q9Y2R5 130 aaKnown RBP28.03■■■□□ 2.08
SSU72-201ENST00000291386 FAM170AA1A519 330 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 MFAP3LO75121 409 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 CLCN5P51795 746 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 VPS36Q86VN1 386 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 MCOLN2Q8IZK6 566 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 FAM3CQ92520 227 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 FCRL2Q96LA5 508 aaPredicted RBP28.02■■■□□ 2.08
SSU72-201ENST00000291386 NPY6RQ99463 290 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms