RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KLF6Q99612 283 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 TMLHEQ9NVH6 421 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 NUDT5Q9UKK9 219 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 CLUHO75153 1309 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 A0A0U1RQF3 1178 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 STIP1P31948 543 aaKnown RBP18.61■□□□□ 0.57
CAPN1-201ENST00000279247 ELK3P41970 407 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 STAT4Q14765 748 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
CAPN1-201ENST00000279247 RNF187Q5TA31 235 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-201ENST00000279247 MFSD5Q6N075 450 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 PCGF5Q86SE9 256 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 CROCCP2Q86T23 111 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 C10orf67Q8IYJ2 551 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 ZNF670Q9BS34 389 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 DDX20Q9UHI6 824 aaKnown RBP18.61■□□□□ 0.57
CAPN1-201ENST00000279247 GOLGA8RI6L899 631 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 AMHP03971 560 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 FBF1Q8TES7 1133 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 DDIT4Q9NX09 232 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 FAM169AQ9Y6X4 670 aa18.61■□□□□ 0.57
CAPN1-201ENST00000279247 ALOX15BO15296 676 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 B4GALT3O60512 393 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 MAP2K2P36507 400 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 AP1B1Q10567 949 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 IFT88Q13099 833 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 DPYSL2Q16555 572 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 CCSAPQ6IQ19 270 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 ZNF280BQ86YH2 543 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 SCAMP5Q8TAC9 235 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 ETNK1Q9HBU6 452 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 UBN1Q9NPG3 1134 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FAM72CH0Y354 149 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FAM72AQ5TYM5 149 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 OTUD1Q5VV17 481 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 SLC9A4Q6AI14 798 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FAM72DQ6L9T8 149 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 SRLQ86TD4 932 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 LRRTM3Q86VH5 581 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FAM72BQ86X60 149 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 ATXN2LQ8WWM7 1075 aaKnown RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 POPDC2Q9HBU9 364 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 STAP1Q9ULZ2 295 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 HGSO14964 777 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 ODC1P11926 461 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 GCAP28676 217 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 RNASELQ05823 741 aaKnown RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 SDHAF4Q5VUM1 108 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 LRRC34Q8IZ02 419 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 OR10T2Q8NGX3 314 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 CENPIQ92674 756 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 RNF34Q969K3 372 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 RTP3Q9BQQ7 232 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 C11orf84Q9BUA3 381 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FRMD8P1Q9BZ68 369 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.6■□□□□ 0.57
CAPN1-201ENST00000279247 DTLQ9NZJ0 730 aa18.6■□□□□ 0.57
CAPN1-201ENST00000279247 A0A1W2PPM1 405 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 MFSD11O43934 449 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 FYNP06241 537 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 CKBP12277 381 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 TGM2P21980 687 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 NOS2P35228 1153 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 DENND5BQ6ZUT9 1274 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 METTL23Q86XA0 190 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 CHMP6Q96FZ7 201 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 ANLNQ9NQW6 1124 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 MAD1L1Q9Y6D9 718 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 FKTNO75072 461 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 METTL18O95568 372 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 HOXD10P28358 340 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 PCSK1P29120 753 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 ATP5DP30049 168 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 GRIA1P42261 906 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 MTFR1Q15390 333 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 NCBP2-AS2Q69YL0 99 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 HEATR6Q6AI08 1181 aaKnown RBP18.59■□□□□ 0.57
CAPN1-201ENST00000279247 OVOS1Q6IE37 1185 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 RNF139Q8WU17 664 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 DEPDC1BQ8WUY9 529 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 TTC25Q96NG3 672 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 FZD10Q9ULW2 581 aa18.59■□□□□ 0.57
CAPN1-201ENST00000279247 KBTBD13C9JR72 458 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 DAB1O75553 588 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 OR1G1P47890 313 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 SCN4BQ8IWT1 228 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 TMEM86AQ8N2M4 240 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 ARHGEF4Q9NR80 690 aa18.58■□□□□ 0.57
CAPN1-201ENST00000279247 MAGED2Q9UNF1 606 aaPredicted RBP18.58■□□□□ 0.57
CAPN1-201ENST00000279247 DAOAP59103 153 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 RTN4RL1Q86UN2 441 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-201ENST00000279247 CEP57Q86XR8 500 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 ECHDC2Q86YB7 292 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 ATP11CQ8NB49 1132 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 C12orf65Q9H3J6 166 aaKnown RBP18.58■□□□□ 0.56
CAPN1-201ENST00000279247 STARD7Q9NQZ5 370 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 PAK5Q9P286 719 aa18.58■□□□□ 0.56
CAPN1-201ENST00000279247 CDH9Q9ULB4 789 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms