RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ALX1Q15699 326 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CARTPTQ16568 116 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 FAM182AQ5T1J6 154 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 TRIM72Q6ZMU5 477 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM126BQ8IUX1 230 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 BANPQ8N9N5 519 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 HM13Q8TCT9 377 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 UQCC2Q9BRT2 126 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 AP4S1Q9Y587 144 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ARHGEF37A1IGU5 675 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 hCG_2039718K7EN88 272 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SERPINA6P08185 405 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 DSTNP60981 165 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 C19orf57Q0VDD7 668 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 NFATC3Q12968 1075 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PDIA2Q13087 525 aaKnown RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 STX3Q13277 289 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PUM3Q15397 648 aaKnown RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 NRF1Q16656 503 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 UBE2SQ16763 222 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 KLHL38Q2WGJ6 581 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 LRIT3Q3SXY7 679 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 GJB7Q6PEY0 223 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM26Q6ZUK4 368 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SV2BQ7L1I2 683 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CARM1Q86X55 608 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ARID3BQ8IVW6 561 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 DEFB107AQ8IZN7 70 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ATG4AQ8WYN0 398 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF512BQ96KM6 892 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 C1orf50Q9BV19 199 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 RMND5AQ9H871 391 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SNTG2Q9NY99 539 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 RWDD3Q9Y3V2 267 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 MROH5Q6ZUA9 1318 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 BAZ2BQ9UIF8 2168 aaKnown RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CLDN3O15551 220 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SNX2O60749 519 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 NTSR2O95665 410 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 IL1BP01584 269 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 CAPNS1P04632 268 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 DHRS4L1P0CG22 281 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF26P17031 533 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PHKA1P46020 1223 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 AQP5P55064 265 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 COPZ1P61923 177 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 GBE1Q04446 702 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PMS2P3Q13401 168 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SEC23AQ15436 765 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 BBS9Q3SYG4 887 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SLC10A5Q5PT55 438 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SLX4IPQ5VYV7 408 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 UTS2BQ765I0 119 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 AKAP14Q86UN6 197 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF341Q9BYN7 854 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 WWP1Q9H0M0 922 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SLC38A10Q9HBR0 1119 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SAYSD1Q9NPB0 183 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 AVENQ9NQS1 362 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 PSMC3IPQ9P2W1 217 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SEPT3Q9UH03 358 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 SLC8A2Q9UPR5 921 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF652Q9Y2D9 606 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF839A8K0R7 811 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PIAS1O75925 651 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ARHGEF15O94989 841 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 KITP10721 976 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ETV4P43268 484 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 SLC26A2P50443 739 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CACNB3P54284 484 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 NME3Q13232 169 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 DPYSQ14117 519 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 FASTKD3Q14CZ7 662 aaKnown RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 KRT80Q6KB66 452 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 AGMOQ6ZNB7 445 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CHSY1Q86X52 802 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 FIBCD1Q8N539 461 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 VPS37AQ8NEZ2 397 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 RILPQ96NA2 401 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 FERD3LQ96RJ6 166 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF347Q96SE7 839 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 NOL6Q9H6R4 1146 aaKnown RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 NANOGQ9H9S0 305 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms