RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 PCED1BQ96HM7 432 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 VPS39Q96JC1 886 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 PPP1R36Q96LQ0 422 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 DUSP16Q9BY84 665 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 ENTPD7Q9NQZ7 604 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 CTNNAL1Q9UBT7 734 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 CITO14578 2027 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 STBD1O95210 358 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 AGTP01019 485 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 LRG1P02750 347 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
SFXN5-201ENST00000272433 KRT4P19013 534 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 LSP1P33241 339 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 NRLP54845 237 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 BMPR2Q13873 1038 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 RPS6KA2Q15349 733 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 LRRC8DQ7L1W4 858 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 ZC3H3Q8IXZ2 948 aaKnown RBP11.48□□□□□ -0.57
SFXN5-201ENST00000272433 STAMBPL1Q96FJ0 436 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
SFXN5-201ENST00000272433 RRP15Q9Y3B9 282 aaKnown RBP11.48□□□□□ -0.57
SFXN5-201ENST00000272433 APOC4-APOC2K7ER74 178 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 APOC2P02655 101 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF865P0CJ78 1059 aaPredicted RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 MYL4P12829 197 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TBX4P57082 545 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 KAT2BQ92831 832 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CCT8L2Q96SF2 557 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TACO1Q9BSH4 297 aaKnown RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PCDH9Q9HC56 1237 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 NT5MQ9NPB1 228 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 RBM22Q9NW64 420 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■■■□□ 14.9
SFXN5-201ENST00000272433 CDH9Q9ULB4 789 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 LAMB2P55268 1798 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 hCG_1818297A0A087WSY0 165 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 H7C4K7 107 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 FSCN2O14926 492 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PAPSS1O43252 624 aaPredicted RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CHKAP35790 457 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 GRIK3Q13003 919 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TTC27Q6P3X3 843 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TAS2R42Q7RTR8 314 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 NUDCD3Q8IVD9 361 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ALKBH8Q96BT7 664 aaKnown RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ERLEC1Q96DZ1 483 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CHMP6Q96FZ7 201 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 RNF157Q96PX1 679 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CDK5RAP2Q96SN8 1893 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 H0Y626 953 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 RNF103O00237 685 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CES2O00748 559 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 NCF2P19878 526 aaPredicted RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ABCG1P45844 678 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 MRPS5P82675 430 aaKnown RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 NSUN2Q08J23 767 aaKnown RBP eCLIP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 SLC12A1Q13621 1099 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TTC31Q49AM3 519 aaPredicted RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 LRRC6Q86X45 466 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 NDUFAF2Q8N183 169 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 GANCQ8TET4 914 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 LHX5Q9H2C1 402 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PRDM12Q9H4Q4 367 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PSMC3IPQ9P2W1 217 aaPredicted RBP11.47□□□□□ -0.57
SFXN5-201ENST00000272433 PTCH2Q9Y6C5 1203 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 DOCK2Q92608 1830 aa11.47□□□□□ -0.57
SFXN5-201ENST00000272433 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 CBX4O00257 560 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 NEMP1O14524 444 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 DNALI1O14645 258 aaPredicted RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 LIASO43766 372 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 GPC4O75487 556 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 SELPP16109 830 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 PAMP19021 973 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 RPL22P35268 128 aaKnown RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 GPD2P43304 727 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 GBE1Q04446 702 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 ZNF844Q08AG5 666 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 PLD1Q13393 1074 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 DCLRE1AQ6PJP8 1040 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 TTC30AQ86WT1 665 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 ZDHHC17Q8IUH5 632 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 BLOC1S5Q8TDH9 187 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms