RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ALDH1A2O94788 518 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 CAVIN2O95810 425 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 KLKB1P03952 638 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 RALAP11233 206 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 TYRP14679 529 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 BCKDHBP21953 392 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 GBP1P32455 592 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 LIMK1P53667 647 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 CREB5Q02930 508 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 CUL2Q13617 745 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 AASDHQ4L235 1098 aaPredicted RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 DCAF17Q5H9S7 520 aaPredicted RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 C10orf76Q5T2E6 689 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 TPGS1Q6ZTW0 290 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 C11orf74Q86VG3 221 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 TTC30AQ86WT1 665 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 TERB1Q8NA31 727 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 BBS2Q9BXC9 721 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 SMOC1Q9H4F8 434 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 ZDHHC4Q9NPG8 344 aa10.22□□□□□ -0.77
VPS41-201ENST00000265745 DNAJC17Q9NVM6 304 aaKnown RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 LSM7Q9UK45 103 aaKnown RBP10.22□□□□□ -0.77
VPS41-201ENST00000265745 TULP2O00295 520 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 PSMA7O14818 248 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 PMM2O15305 246 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 CISD3P0C7P0 127 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 BMP6P22004 513 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 NTSR1P30989 418 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 P2RY2P41231 377 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 SLC8A3P57103 927 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 COG7P83436 770 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 STIM1Q13586 685 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 PM20D1Q6GTS8 502 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 ISM2Q6H9L7 571 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 GRAMD4Q6IC98 578 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 TCEAL6Q6IPX3 200 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 TOGARAM2Q6ZUX3 1019 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 TRMT11Q7Z4G4 463 aaKnown RBP10.21□□□□□ -0.77
VPS41-201ENST00000265745 MIB1Q86YT6 1006 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 ARHGAP18Q8N392 663 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.77
VPS41-201ENST00000265745 HMGB4Q8WW32 186 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 RLN3Q8WXF3 142 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 DDX1Q92499 740 aaKnown RBP10.21□□□□□ -0.77
VPS41-201ENST00000265745 TCEAL3Q969E4 200 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 P2RY11Q96G91 374 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 CEP63Q96MT8 703 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 XPO6Q96QU8 1125 aaKnown RBP10.21□□□□□ -0.77
VPS41-201ENST00000265745 METTL14Q9HCE5 456 aaKnown RBP10.21□□□□□ -0.77
VPS41-201ENST00000265745 FBXO10Q9UK96 956 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 MAN1B1Q9UKM7 699 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.77
VPS41-201ENST00000265745 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 TCRBV21S2A2A0A5A6 115 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 ZBED1O96006 694 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 PENKP01210 267 aaPredicted RBP10.2□□□□□ -0.78
VPS41-201ENST00000265745 ADRB1P08588 477 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 TPRP12270 2363 aaKnown RBP10.2□□□□□ -0.78
VPS41-201ENST00000265745 CHKAP35790 457 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 FMO5P49326 533 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 TKTL1P51854 596 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 YWHAGP61981 247 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS41-201ENST00000265745 PDE4CQ08493 712 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 EFEMP1Q12805 493 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 LRMPQ12912 555 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 GOLGA7BQ2TAP0 167 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 MAP7D1Q3KQU3 841 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 PKDCCQ504Y2 493 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 SGO2Q562F6 1265 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 PPM1JQ5JR12 505 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 STPG1Q5TH74 334 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 IL31Q6EBC2 164 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 TTI2Q6NXR4 508 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 FOXR2Q6PJQ5 311 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 BHLHA9Q7RTU4 235 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 UBR7Q8N806 425 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 FRMD1Q8N878 549 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 ACOX2Q99424 681 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 CD248Q9HCU0 757 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 PLK2Q9NYY3 685 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 MARCH2Q9P0N8 246 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 MBD1Q9UIS9 605 aaPredicted RBP10.2□□□□□ -0.78
VPS41-201ENST00000265745 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 ZNF510Q9Y2H8 683 aa10.2□□□□□ -0.78
VPS41-201ENST00000265745 O00370 1275 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 XPO1O14980 1071 aaKnown RBP10.19□□□□□ -0.78
VPS41-201ENST00000265745 PAEPP09466 180 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 VDRP11473 427 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 CD19P15391 556 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 GABRG2P18507 467 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
VPS41-201ENST00000265745 CORO1AP31146 461 aaKnown RBP10.19□□□□□ -0.78
VPS41-201ENST00000265745 PPP1R2P41236 205 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 WASP42768 502 aa10.19□□□□□ -0.78
VPS41-201ENST00000265745 DGKGP49619 791 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms