RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 BBS5Q8N3I7 341 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 BTBD10Q9BSF8 475 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 SYT11Q9BT88 431 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 CYP2F1P24903 491 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 ADIGQ0VDE8 80 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 RNF148Q8N7C7 305 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 LENG1Q96BZ8 264 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 OXNAD1Q96HP4 312 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 TEPSINQ96N21 525 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 GAD1Q99259 594 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 GTSE1Q9NYZ3 720 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 PGK1P00558 417 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 IL1R2P27930 398 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 MLH1P40692 756 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 BST1Q10588 318 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 MSS51Q4VC12 460 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 CLPTM1LQ96KA5 538 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 ZNF395Q9H8N7 513 aaPredicted RBP20.48■□□□□ 0.87
CSPG5-201ENST00000264723 NUDT5Q9UKK9 219 aa20.48■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA8CPA6NN73 597 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 E9PBE3 544 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 KLHL41O60662 606 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 ENO3P13929 434 aaPredicted RBP20.47■□□□□ 0.87
CSPG5-201ENST00000264723 MX2P20592 715 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 SLC12A1Q13621 1099 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 RNASEH2BQ5TBB1 312 aaKnown RBP20.47■□□□□ 0.87
CSPG5-201ENST00000264723 KCNT2Q6UVM3 1135 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 A0A1B0GUL6 1792 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 ITGAVP06756 1048 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 TPH1P17752 444 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 PCSK1P29120 753 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 RTP1P59025 263 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 BBS12Q6ZW61 710 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 GSDMBQ8TAX9 411 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 NTPCRQ9BSD7 190 aaKnown RBP20.47■□□□□ 0.87
CSPG5-201ENST00000264723 TNFSF13BQ9Y275 285 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 DRG1Q9Y295 367 aaKnown RBP20.47■□□□□ 0.87
CSPG5-201ENST00000264723 SLC4A7Q9Y6M7 1214 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 TMEM63AO94886 807 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 ASMTLO95671 621 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 RGS2P41220 211 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 GLB1LQ6UWU2 654 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 ACSS3Q9H6R3 686 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 KRT82Q9NSB4 513 aa20.47■□□□□ 0.87
CSPG5-201ENST00000264723 GPR25O00155 361 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 ACADSBP45954 432 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 BCAT1P54687 386 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 USP50Q70EL3 339 aaPredicted RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 CLNKQ7Z7G1 428 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 SCG3Q8WXD2 468 aaKnown RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 APOPT1Q96IL0 206 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 TXLNGYQ9BZA5 131 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 DENND2DQ9H6A0 471 aaPredicted RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 GOLGA2P5Q9HBQ8 144 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 HMGXB4Q9UGU5 601 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 IPO11Q9UI26 975 aaKnown RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 TM9SF1O15321 606 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 AVPR1AP37288 418 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 MFSD10Q14728 455 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 TAS1R3Q7RTX0 852 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 MIB1Q86YT6 1006 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 SCUBE1Q8IWY4 988 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 IPMKQ8NFU5 416 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 SYT17Q9BSW7 474 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 ADA2Q9NZK5 511 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 SLC39A10Q9ULF5 831 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 SPDYE5A6NIY4 337 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 THP07101 528 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 CRELD2Q6UXH1 353 aaPredicted RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 FAM183BPQ6ZVS7 135 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 URGCPQ8TCY9 931 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 TEKT4Q8WW24 435 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 DDX43Q9NXZ2 648 aaKnown RBP20.46■□□□□ 0.87
CSPG5-201ENST00000264723 ITGA11Q9UKX5 1188 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 KIAA1257Q9ULG3 409 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 GRID1Q9ULK0 1009 aa20.46■□□□□ 0.87
CSPG5-201ENST00000264723 PLCH1Q4KWH8 1693 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 KPNA7A9QM74 516 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 TKTL1P51854 596 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 ITGA9Q13797 1035 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 ZNF268Q14587 947 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 FASTKD1Q53R41 847 aaKnown RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 RFWD3Q6PCD5 774 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 BHMTQ93088 406 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 SEPT5Q99719 369 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 NMUR2Q9GZQ4 415 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 KIF1CO43896 1103 aaKnown RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 PMPCBO75439 489 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 ARIH2O95376 493 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 ATICP31939 592 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 SLC45A4Q5BKX6 768 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 N4BP2L1Q5TBK1 243 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 SCARA3Q6AZY7 606 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 PPCSQ9HAB8 311 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 TXNRD2Q9NNW7 524 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 SLC38A7Q9NVC3 462 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 NKX1-2Q9UD57 310 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms