RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 EGFRP00533 1210 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ITGAVP06756 1048 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 EFEMP1Q12805 493 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 MED21Q13503 144 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 AURKCQ9UQB9 309 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 STX7O15400 261 aaKnown RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ESRRBO95718 433 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 AVPR1AP37288 418 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ZNF135P52742 658 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 CDH17Q12864 832 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 PDE1CQ14123 709 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ZRANB3Q5FWF4 1079 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 LRRC43Q8N309 656 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 MRPL46Q9H2W6 279 aaKnown RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 DMAP1Q9NPF5 467 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 DNAJC16Q9Y2G8 782 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ACOT9Q9Y305 439 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 CHRM3P20309 590 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 KLC1Q07866 573 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 BFSP2Q13515 415 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 AUHQ13825 339 aaKnown RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 UMODL1Q5DID0 1318 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 RNF103O00237 685 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 CHADO15335 359 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 DDX3YO15523 660 aaKnown RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 C15orf59Q2T9L4 293 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 HSFY1Q96LI6 401 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 LBHD1Q9BQE6 289 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ASPSCR1Q9BZE9 553 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ARHGAP28Q9P2N2 729 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
PHRF1-201ENST00000264555 SNED1Q8TER0 1413 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 GP5P40197 560 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 RPL7AP62424 266 aaKnown RBP17.21■□□□□ 0.35
PHRF1-201ENST00000264555 FAM183BPQ6ZVS7 135 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 SAE1Q9UBE0 346 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-201ENST00000264555 ACTL7BQ9Y614 415 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 WDR27A2RRH5 827 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 SOAT2O75908 522 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 GRTP1Q5TC63 336 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 LZTR1Q8N653 840 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 TEX9Q8N6V9 391 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 USP13Q92995 863 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-201ENST00000264555 YIPF3Q9GZM5 350 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 EIF4E1BA6NMX2 242 aaKnown RBP17.21■□□□□ 0.35
PHRF1-201ENST00000264555 B4GALT5O43286 388 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 ABHD2P08910 425 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 FBXO44Q9H4M3 255 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.35
PHRF1-201ENST00000264555 H0Y626 953 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 MPOP05164 745 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 KRT16P08779 473 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 THRAP10827 490 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 NOS2P35228 1153 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 NPY2RP49146 381 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.34
PHRF1-201ENST00000264555 RASA2Q15283 850 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 SPANXN3Q5MJ09 141 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 BBS12Q6ZW61 710 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 DYRK4Q9NR20 520 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 RIC8BQ9NVN3 520 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 RBM22Q9NW64 420 aaKnown RBP eCLIP17.21■□□□□ 0.345e-8■■■■■ 27.2
PHRF1-201ENST00000264555 DMAC2Q9NW81 257 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 SLC13A4Q9UKG4 626 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 PHLPP1O60346 1717 aa17.21■□□□□ 0.34
PHRF1-201ENST00000264555 hCG_1818297A0A087WSY0 165 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SLC12A8A0AV02 714 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 DNAJC8O75937 253 aaPredicted RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 ETS1P14921 441 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 STX5Q13190 355 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 KBTBD12Q3ZCT8 623 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 FAM117BQ6P1L5 589 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 LBX2Q6XYB7 198 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SRPK1Q96SB4 655 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 NIFKQ9BYG3 293 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 CHST12Q9NRB3 414 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 GID8Q9NWU2 228 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SLC15A5A6NIM6 579 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SLCO1B7G3V0H7 640 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 ZBTB22O15209 634 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 PTPN4P29074 926 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 ELAVL2Q12926 359 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 CEP41Q9BYV8 373 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 C10orf88Q9H8K7 445 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 PDGFCQ9NRA1 345 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 UBP1Q9NZI7 540 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 MAP4P27816 1152 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 VHLP40337 213 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 TRIP10Q15642 601 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms