RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TMPRSS15P98073 1019 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 TSPY1Q01534 308 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PRPSAP1Q14558 356 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PDK1Q15118 436 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ZC3H12AQ5D1E8 599 aaKnown RBP16.85■□□□□ 0.29
CTCF-201ENST00000264010 NXF3Q9H4D5 531 aaKnown RBP16.85■□□□□ 0.29
CTCF-201ENST00000264010 ZFP69BQ9UJL9 534 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 FOXO6A8MYZ6 492 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SERPINB3P29508 390 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PPP1R15BQ5SWA1 713 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 C9orf57Q5W0N0 161 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PMF1Q6P1K2 205 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 VSTM1Q6UX27 236 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SLC26A11Q86WA9 606 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ZNF354CQ86Y25 554 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 CYP4X1Q8N118 509 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ARHGAP24Q8N264 748 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 ZNF670Q9BS34 389 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SLC13A1Q9BZW2 595 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 PCDH18Q9HCL0 1135 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SLC45A1Q9Y2W3 748 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 SH3BP1Q9Y3L3 701 aa16.85■□□□□ 0.29
CTCF-201ENST00000264010 TRIM49D1C9J1S8 452 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 FAM189A1O60320 539 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 TOMM70O94826 608 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 SERPINB6P35237 376 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 SERPINB9P50453 376 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 INCA1Q0VD86 236 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 PPP2R5DQ14738 602 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 PID1Q7Z2X4 250 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 EME2A4GXA9 379 aaPredicted RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 ABLIM1O14639 778 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 TM9SF1O15321 606 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 STAMBPO95630 424 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 NR2C2P49116 596 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 ZNF157P51786 506 aaPredicted RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 ARFIP2P53365 341 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 SESN2P58004 480 aaPredicted RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 MTFR1Q15390 333 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 ERP27Q96DN0 273 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 SNX27Q96L92 541 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 TSSK1BQ9BXA7 367 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 RXFP1Q9HBX9 757 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 NPHS2Q9NP85 383 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 M0QYT0 321 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 EEF2KO00418 725 aaKnown RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 FDFT1P37268 417 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 BTKQ06187 659 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 ANKRD22Q5VYY1 191 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 PIGWQ7Z7B1 504 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 PPP4R1Q8TF05 950 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 BRI3BPQ8WY22 251 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 C16orf70Q9BSU1 422 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 MANSC1Q9H8J5 431 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 TMA7Q9Y2S6 64 aaKnown RBP16.84■□□□□ 0.29
CTCF-201ENST00000264010 TSC22D4Q9Y3Q8 395 aa16.84■□□□□ 0.29
CTCF-201ENST00000264010 MAP3K7O43318 606 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 STAU1O95793 577 aaKnown RBP16.83■□□□□ 0.29
CTCF-201ENST00000264010 CTSHP09668 335 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 GABRB2P47870 512 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 SCNN1BP51168 640 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 GNASQ5JWF2 1037 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 CYTH4Q9UIA0 394 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 EP400Q96L91 3159 aa16.83■□□□□ 0.29
CTCF-201ENST00000264010 UNCXA6NJT0 531 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 DNAJC8O75937 253 aaPredicted RBP16.83■□□□□ 0.28
CTCF-201ENST00000264010 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 RPA3P35244 121 aaPredicted RBP16.83■□□□□ 0.28
CTCF-201ENST00000264010 GDF10P55107 478 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 LACTB2Q53H82 288 aaPredicted RBP16.83■□□□□ 0.28
CTCF-201ENST00000264010 UBAP2Q5T6F2 1119 aaKnown RBP16.83■□□□□ 0.28
CTCF-201ENST00000264010 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 STK32AQ8WU08 396 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 SSC5DA1L4H1 1573 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 TPI1P60174 286 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 PLD5Q8N7P1 536 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 CCT6BQ92526 530 aa16.83■□□□□ 0.28
CTCF-201ENST00000264010 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
CTCF-201ENST00000264010 TTC36A6NLP5 189 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 SNAI1O95863 264 aaPredicted RBP16.82■□□□□ 0.28
CTCF-201ENST00000264010 PCSK1P29120 753 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 ADIGQ0VDE8 80 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 C6orf89Q6UWU4 347 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 ISLR2Q6UXK2 745 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 NUDCD3Q8IVD9 361 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 DEFB106AQ8N104 65 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 CCDC33Q8N5R6 958 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 MAML1Q92585 1016 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 SGIP1Q9BQI5 828 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 PHACTR1Q9C0D0 580 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 ETNK2Q9NVF9 386 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 BFARQ9NZS9 450 aa16.82■□□□□ 0.28
CTCF-201ENST00000264010 TAF2Q6P1X5 1199 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms