RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 RPRD1AQ96P16 312 aaPredicted RBP12.39□□□□□ -0.43
SMG6-201ENST00000263073 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
SMG6-201ENST00000263073 FSBPO95073 299 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
SMG6-201ENST00000263073 FASP25445 335 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 ACADSBP45954 432 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 ZSWIM7Q19AV6 140 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 BOLA3Q53S33 107 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 SCARA3Q6AZY7 606 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 SH3BP5LQ7L8J4 393 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 CHMP1BQ7LBR1 199 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 LINC00523Q86TU6 105 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 STK32CQ86UX6 486 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 SP8Q8IXZ3 490 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 CYP2W1Q8TAV3 490 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 CENPTQ96BT3 561 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
SMG6-201ENST00000263073 NT5MQ9NPB1 228 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
SMG6-201ENST00000263073 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
SMG6-201ENST00000263073 TP53BP2Q13625 1128 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 KYAT1Q16773 422 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ZIK1Q3SY52 487 aaPredicted RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 FAM228AQ86W67 206 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 LRRC40Q9H9A6 602 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 UBAP1Q9NZ09 502 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 POLG2Q9UHN1 485 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 MKL2Q9ULH7 1088 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 VANGL2Q9ULK5 521 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 PNPLA6Q8IY17 1366 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 CAPZA2P47755 286 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 PDIA6Q15084 440 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 VPS37AQ8NEZ2 397 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 DUSP9Q99956 384 aaKnown RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ANXA9O76027 345 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 KLHL18O94889 574 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 CYBBP04839 570 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 APOA4P06727 396 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ZNF57Q68EA5 555 aaPredicted RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 DNAJC18Q9H819 358 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 DDX3XO00571 662 aaKnown RBP eCLIP12.38□□□□□ -0.434e-10■□□□□ 10.6
SMG6-201ENST00000263073 PRRG1O14668 218 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 PLA2G6O60733 806 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 CDK16Q00536 496 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ITGB3BPQ13352 177 aaPredicted RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 ADRM1Q16186 407 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 NPNTQ6UXI9 565 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
SMG6-201ENST00000263073 EDEM1Q92611 657 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 MYRFQ9Y2G1 1151 aa12.38□□□□□ -0.43
SMG6-201ENST00000263073 ATG7O95352 703 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TNFAIP8O95379 198 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 NR6A1Q15406 480 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 QPCTQ16769 361 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 APOPT1Q96IL0 206 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 ACOT9Q9Y305 439 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 GNG14A0A1W2PPG7 69 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TIMM44O43615 452 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 CAPN1P07384 714 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 GARTP22102 1010 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TIMM13Q9Y5L4 95 aaPredicted RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 ASB14A6NK59 587 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TAF4O00268 1085 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 MAP2K7O14733 419 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 ALOX15P16050 662 aaPredicted RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 COX10Q12887 443 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 TMEM26Q6ZUK4 368 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 ZNF720Q7Z2F6 126 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 MCOLN2Q8IZK6 566 aa12.37□□□□□ -0.43
SMG6-201ENST00000263073 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
SMG6-201ENST00000263073 APBA2Q99767 749 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms