RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SNAI1O95863 264 aaPredicted RBP23.42■■□□□ 1.34
MCF2L-201ENST00000261963 FAM47CQ5HY64 1035 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 RASIP1Q5U651 963 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 HHATQ5VTY9 493 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 PQLC3Q8N755 202 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 PLD5Q8N7P1 536 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 AZIN2Q96A70 460 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 NR1H4Q96RI1 486 aaPredicted RBP23.42■■□□□ 1.34
MCF2L-201ENST00000261963 ZNF184Q99676 751 aaPredicted RBP23.42■■□□□ 1.34
MCF2L-201ENST00000261963 MIS12Q9H081 205 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 CHCHD3Q9NX63 227 aaKnown RBP23.42■■□□□ 1.34
MCF2L-201ENST00000261963 ZNF212Q9UDV6 495 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 TSHRP16473 764 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 ELK3P41970 407 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 SYCP2LQ5T4T6 812 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 LDLRAD1Q5T700 205 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 LVRNQ6Q4G3 990 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 ACOT1Q86TX2 421 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 MCUR1Q96AQ8 359 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 NDNQ99608 321 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 SLC4A5Q9BY07 1137 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 CITO14578 2027 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 SCN1AP35498 2009 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 GYG2O15488 501 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 HOXA11P31270 313 aaPredicted RBP23.41■■□□□ 1.34
MCF2L-201ENST00000261963 STILQ15468 1287 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 KLHL23Q8NBE8 558 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 DTX3LQ8TDB6 740 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 FAM49BQ9NUQ9 324 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 SNX9Q9Y5X1 595 aa23.41■■□□□ 1.34
MCF2L-201ENST00000261963 H7C0C1 242 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 TROVE2P10155 538 aaKnown RBP eCLIP23.4■■□□□ 1.34
MCF2L-201ENST00000261963 ATP5OP48047 213 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 KRT81Q14533 505 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 CA9Q16790 459 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 ZNF75CPQ92670 426 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-201ENST00000261963 LBHD1Q9BQE6 289 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-201ENST00000261963 PCDH18Q9HCL0 1135 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 NGRNQ9NPE2 291 aaKnown RBP23.4■■□□□ 1.34
MCF2L-201ENST00000261963 TEX264Q9Y6I9 313 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 KIZQ2M2Z5 673 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 CNPY1Q3B7I2 92 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 SCYL2Q6P3W7 929 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 TMEM110Q86TL2 294 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 ZNF410Q86VK4 478 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 VPS52Q8N1B4 723 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-201ENST00000261963 FAM172AQ8WUF8 416 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 SLC35F5Q8WV83 523 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 SNTG2Q9NY99 539 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 SLC4A7Q9Y6M7 1214 aa23.4■■□□□ 1.34
MCF2L-201ENST00000261963 PAPSS1O43252 624 aaPredicted RBP23.39■■□□□ 1.34
MCF2L-201ENST00000261963 HAUS5O94927 633 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 UBTFL6P0CB48 400 aaPredicted RBP23.39■■□□□ 1.34
MCF2L-201ENST00000261963 CCNA1P78396 465 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 PDK2Q15119 407 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 BOLA3Q53S33 107 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 USP50Q70EL3 339 aaPredicted RBP23.39■■□□□ 1.34
MCF2L-201ENST00000261963 SCUBE3Q8IX30 993 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 BANPQ8N9N5 519 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 PCDH19Q8TAB3 1148 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 RTP4Q96DX8 246 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 PTCD3Q96EY7 689 aaKnown RBP23.39■■□□□ 1.34
MCF2L-201ENST00000261963 TUBGCP4Q9UGJ1 667 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 PCNTO95613 3336 aa23.39■■□□□ 1.34
MCF2L-201ENST00000261963 TCRBV9S1A1TA0A576 114 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 AVILO75366 819 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 LYNP07948 512 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 PYGBP11216 843 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 SMPD1P17405 629 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 ADRA1DP25100 572 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 SLC6A3Q01959 620 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 DCAF4L1Q3SXM0 396 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 MAP7D3Q8IWC1 876 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 ZNF276Q8N554 614 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 ZC3H15Q8WU90 426 aaKnown RBP23.39■■□□□ 1.33
MCF2L-201ENST00000261963 USP6NLQ92738 828 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 NSL1Q96IY1 281 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 CYTH2Q99418 400 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 KLF6Q99612 283 aaPredicted RBP23.39■■□□□ 1.33
MCF2L-201ENST00000261963 LPIN3Q9BQK8 851 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 SNRNP25Q9BV90 132 aaKnown RBP23.39■■□□□ 1.33
MCF2L-201ENST00000261963 ADAMTS10Q9H324 1103 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 ARL8BQ9NVJ2 186 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 DDX43Q9NXZ2 648 aaKnown RBP23.39■■□□□ 1.33
MCF2L-201ENST00000261963 NUMBLQ9Y6R0 609 aa23.39■■□□□ 1.33
MCF2L-201ENST00000261963 CFAP69A5D8W1 941 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 KBTBD13C9JR72 458 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 CHADO15335 359 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 HOXD8P13378 290 aaPredicted RBP23.38■■□□□ 1.33
MCF2L-201ENST00000261963 GTF3C2Q8WUA4 911 aaPredicted RBP23.38■■□□□ 1.33
MCF2L-201ENST00000261963 NCSTNQ92542 709 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 FAF2Q96CS3 445 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 SNX27Q96L92 541 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 SPATA16Q9BXB7 569 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 EIF2AQ9BY44 585 aaKnown RBP23.38■■□□□ 1.33
MCF2L-201ENST00000261963 B3GNT5Q9BYG0 378 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 C12orf65Q9H3J6 166 aaKnown RBP23.38■■□□□ 1.33
MCF2L-201ENST00000261963 KRT82Q9NSB4 513 aa23.38■■□□□ 1.33
MCF2L-201ENST00000261963 TRIP11Q15643 1979 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms