RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 BBS7Q8IWZ6 715 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 MARK4Q96L34 752 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 APOL2Q9BQE5 337 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 DOLKQ9UPQ8 538 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM25AB3EWG3 89 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM25CB3EWG5 89 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM25GB3EWG6 89 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 KLRC4O43908 158 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PIAS1O75925 651 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SOAT1P35610 550 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SREBF1P36956 1147 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCR3P51677 355 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TP53BP2Q13625 1128 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RRP1BQ14684 758 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 STK32CQ86UX6 486 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ACTL9Q8TC94 416 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TFB1MQ8WVM0 346 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RIOX1Q9H6W3 641 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ACP6Q9NPH0 428 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 UBDO15205 165 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CALCAP01258 141 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RAP1GAPP47736 663 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 IREB2P48200 963 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PPP3CCP48454 512 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC16A1P53985 500 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 VAC14Q08AM6 782 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 UBAP2LQ14157 1087 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 BTBD8Q5XKL5 378 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 LPCAT4Q643R3 524 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 DHRSXQ8N5I4 330 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PCDH20Q8N6Y1 951 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 UXS1Q8NBZ7 420 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PSMA8Q8TAA3 256 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC7A14Q8TBB6 771 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 FIG4Q92562 907 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ASIC4Q96FT7 647 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 LATS2Q9NRM7 1088 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLIT1O75093 1534 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SP100P23497 879 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CASP5P51878 434 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 POU4F1Q01851 419 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CYP51A1Q16850 503 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 DGKKQ5KSL6 1271 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PKN3Q6P5Z2 889 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ELMSAN1Q6PJG2 1045 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 POC5Q8NA72 575 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ACER1Q8TDN7 264 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TNIP3Q96KP6 325 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 RNF145Q96MT1 663 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 HS6ST1O60243 411 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 APOA4P06727 396 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZSCAN5DPP0CG00 497 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ETFBP38117 255 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CARTPTQ16568 116 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 NFIL3Q16649 462 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 FGD2Q7Z6J4 655 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SNX31Q8N9S9 440 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ENKURQ8TC29 256 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 THAP1Q9NVV9 213 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 MOSPD1Q9UJG1 213 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 MKL2Q9ULH7 1088 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PCDHA3Q9Y5H8 950 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 H2AFYO75367 372 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PGK2P07205 417 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TXNP10599 105 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 BAG6P46379 1132 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PDK1Q15118 436 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATP6AP1LQ52LC2 224 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF57Q68EA5 555 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 C16orf46Q6P387 395 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SEPT1Q8WYJ6 367 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 MPP6Q9NZW5 540 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 LRFN2Q9ULH4 789 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CNOT3O75175 753 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 FLT3P36888 993 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TKFCQ3LXA3 575 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 GLRA4Q5JXX5 417 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRIQKQ629K1 86 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 NARS2Q96I59 477 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 HPDLQ96IR7 371 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PWWP2AQ96N64 755 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 MMP19Q99542 508 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms